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OQ448195.1__WJJ58310.1__110_00147__00144

Bact-Vir

OQ448195.1__WJJ58310.1__110_00147__00144

Identity

Accession:
OQ448195 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-65
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.74 65.0 5.27e-01 98.5% 56.1%
3q5dA02 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.71 62.0 5.50e-01 100.0% 84.5%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 60.0 5.83e-01 96.9% 88.9%
3sqnA02 1.10.1790.40 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › 0.69 55.0 4.53e-01 87.7% 100.0%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.66e-01 93.8% 100.0%
3fxhA00 1.20.120.600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Crystal structure from the mobile metagenome of halifax harbour sewage outfall 0.68 59.0 4.88e-01 95.4% 89.4%
2ktmA00 1.10.790.10 Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain 0.68 46.0 4.59e-01 70.8% 69.1%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.59e-01 95.4% 93.0%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.68 56.0 4.86e-01 96.9% 58.1%
2vm6A00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.68 56.0 4.42e-01 93.8% 49.3%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 47.0 4.26e-01 73.8% 82.4%
1ma1A01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.66 45.0 4.61e-01 83.1% 71.9%
3k7dA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.65 52.0 3.54e-01 89.2% 60.8%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 52.0 4.98e-01 89.2% 89.3%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 51.0 4.89e-01 87.7% 77.3%
6xpdA01 1.20.1510.10 Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain 0.64 50.0 3.56e-01 86.2% 72.3%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 46.0 4.35e-01 95.4% 64.1%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.63 55.0 4.22e-01 96.9% 51.0%
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 45.0 3.78e-01 76.9% 53.5%
2kbwA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.63 51.0 3.96e-01 92.3% 41.2%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.62 45.0 4.26e-01 78.5% 64.9%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 53.0 3.76e-01 98.5% 32.4%
1xo0A01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 49.0 4.11e-01 87.7% 52.3%
2nrlA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 49.0 3.85e-01 90.8% 89.0%
1hlvA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 47.0 4.81e-01 95.4% 98.3%
4c9bB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 45.0 3.08e-01 100.0% 20.9%
4kf8B00 1.25.10.70 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.59 51.0 3.38e-01 96.9% 41.9%
4lmoA00 1.10.132.70 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.59 48.0 3.31e-01 95.4% 31.5%
2vklA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.58 48.0 4.62e-01 95.4% 79.2%
2dl0A01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.58 41.0 4.25e-01 90.8% 81.4%
2vqgA00 1.10.10.1280 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C 0.58 41.0 3.97e-01 76.9% 71.1%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.58 46.0 4.73e-01 87.7% 96.8%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 45.0 4.23e-01 87.7% 75.9%
3c8tA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.57 51.0 4.41e-01 96.9% 80.4%
1c1kA02 1.10.220.50 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Bacteriophage T4, Gp59, helicase assembly protein, C-terminal domain 0.57 47.0 4.02e-01 96.9% 98.3%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.57 42.0 3.93e-01 80.0% 67.1%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.56 43.0 4.02e-01 89.2% 70.1%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.56 44.0 3.25e-01 87.7% 92.7%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.55 43.0 3.82e-01 98.5% 57.1%
2ptfB02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.55 42.0 4.40e-01 90.8% 94.7%
3qnmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 44.0 4.05e-01 90.8% 70.0%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 45.0 4.32e-01 93.8% 83.3%
3cdlB02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.55 46.0 3.79e-01 100.0% 67.7%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.54 46.0 4.04e-01 96.9% 68.0%
3qwwA03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 45.0 3.35e-01 100.0% 43.5%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.54 40.0 3.98e-01 92.3% 77.1%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 46.0 4.02e-01 98.5% 93.1%
6nmnA02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 43.0 3.51e-01 93.8% 85.2%
1jr7A00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.51 43.0 2.89e-01 100.0% 39.9%
1cgnA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.51 45.0 3.67e-01 98.5% 90.3%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 43.0 4.44e-01 96.9% 96.8%
1oj7A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.50 42.0 3.07e-01 98.5% 92.6%
3uitA01 1.20.1440.360 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.50 39.0 3.30e-01 90.8% 84.9%
4ga4A01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.50 38.0 3.77e-01 92.3% 80.6%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4021213 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 66.0 6.65e-01 93.8% 98.5%
4646581 2008.1.1.59 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.74 66.0 4.02e-01 100.0% 21.0%
3726085 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.73 65.0 5.96e-01 100.0% 83.5%
4010159 621.1.1.10 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › DUF4118 0.72 63.0 5.33e-01 100.0% 66.4%
3990494 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.72 64.0 5.86e-01 100.0% 83.5%
4957143 101.21.1.1 alpha arrays › HTH › HTH domain in DNA topoisomerase IV alpha subunit › HTH domain in DNA topoisomerase IV alpha subunit › TP6A_N 0.72 63.0 4.98e-01 100.0% 54.1%
3217497 198.1.1.0 alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.71 57.0 5.47e-01 87.7% 84.0%
3250201 101.1.1.21 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.70 57.0 5.79e-01 89.2% 98.5%
3296508 604.3.1.0 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.69 49.0 3.99e-01 75.4% 81.3%
5045083 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.67 58.0 4.25e-01 100.0% 83.7%
3316066 192.4.1.42 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › WAV3_C 0.67 58.0 4.94e-01 100.0% 60.0%
3331123 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.67 55.0 5.66e-01 95.4% 100.0%
3936163 101.1.1.21 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.66 54.0 5.49e-01 95.4% 100.0%
3255275 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 53.0 5.48e-01 95.4% 95.0%
3227144 3277.2.1.1 alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.65 51.0 4.33e-01 84.6% 53.3%
3306414 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.64 52.0 4.28e-01 100.0% 49.6%
3798489 164.1.1.0 alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II 0.64 57.0 4.77e-01 100.0% 70.0%
3680460 101.1.1.121 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.63 54.0 5.03e-01 95.4% 98.8%
3967220 632.11.1.13 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › PF27144 0.63 39.0 4.00e-01 75.4% 64.1%
3922168 101.1.1.21 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.63 50.0 4.96e-01 90.8% 88.6%
3447076 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 52.0 4.77e-01 95.4% 96.7%
3500575 101.1.1.21 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.63 50.0 5.13e-01 90.8% 100.0%
3844496 592.1.1.12 alpha arrays › PWI domain-like › PWI domain › PWI domain › PP1_inhibitor 0.62 49.0 4.63e-01 95.4% 71.2%
3456188 109.7.1.10 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › WAV3_C 0.61 52.0 5.04e-01 100.0% 84.0%
4971005 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.61 52.0 3.59e-01 96.9% 51.7%
3506685 1134.1.1.0 alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.61 54.0 5.14e-01 98.5% 90.7%
3238440 101.1.1.21 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.60 50.0 5.06e-01 96.9% 100.0%
3313062 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.60 51.0 4.92e-01 98.5% 93.3%
3621409 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.59 50.0 4.64e-01 98.5% 89.4%
4213400 592.2.1.9 alpha arrays › PWI domain-like › YugE-like › YugE-like › PP1_inhibitor 0.59 47.0 4.45e-01 90.8% 80.0%
3943035 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.58 51.0 5.19e-01 100.0% 100.0%
4958530 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 52.0 4.40e-01 98.5% 67.6%
3002 102.1.1.16 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 0.57 40.0 4.19e-01 89.2% 81.7%
2075049 3787.1.1.0 alpha bundles › HAD superfamily helical bundle insertion domain 0.57 45.0 4.17e-01 87.7% 73.3%
4389577 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.57 47.0 3.47e-01 95.4% 40.0%
5015055 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 40.0 2.75e-01 73.8% 85.3%
4954909 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.55 44.0 4.01e-01 86.2% 75.3%
3998584 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.55 50.0 3.97e-01 100.0% 52.0%
4014217 102.5.1.0 alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins 0.55 41.0 3.83e-01 86.2% 80.9%
4984123 131.1.1.3 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.55 44.0 3.37e-01 96.9% 83.3%
142836 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.54 46.0 3.23e-01 98.5% 40.6%
4374802 639.2.1.2 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › DUF2767 0.54 42.0 4.28e-01 92.3% 100.0%
3338006 109.7.1.0 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.54 46.0 3.83e-01 96.9% 55.0%
3201932 604.3.1.1 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.54 45.0 3.88e-01 100.0% 74.3%
3670742 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.54 46.0 3.82e-01 98.5% 57.5%
1806460 604.1.1.8 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › SbsC_spectrin-like 0.53 41.0 4.23e-01 84.6% 85.7%
4949941 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.51 40.0 3.90e-01 84.6% 84.3%
3445034 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.50 44.0 3.37e-01 100.0% 43.2%