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WHA35212.1

Arc-Vir

OQ473815__WHA35212.1__SSRV2-ORF37__00037

Identity

Accession:
OQ473815 ↗
Protein ID:
WHA35212.1 ↗
Kingdom:
archaea

Quality

67.2 mean pLDDT

Taxonomy

Saccharolobus_shibatae_rod_virus_2

TaxID: 3038387

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-113
PDB
D2 high residues 121-215
PDB
Domain cluster: rep: KX467643__AOS58408.1__X__00053__D121-211
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.68 32.0 3.89e-01 87.4% 68.3%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.66 33.0 4.01e-01 90.5% 74.6%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.65 32.0 4.01e-01 85.3% 78.6%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.62 46.0 4.31e-01 84.2% 62.3%
3lxuX02 2.20.25.690 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 32.0 3.64e-01 100.0% 65.3%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 48.0 4.20e-01 88.4% 75.0%
1mkfA02 2.60.40.1340 Mainly Beta › Sandwich › Immunoglobulin-like › Chemokine-binding protein M3-like 0.59 44.0 3.64e-01 80.0% 50.0%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 36.0 4.01e-01 100.0% 81.1%
1xzwA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.57 39.0 3.95e-01 71.6% 70.4%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 35.0 3.41e-01 100.0% 52.7%
4nreA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.57 51.0 4.73e-01 100.0% 97.5%
2l1tA00 2.30.110.70 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.56 43.0 4.15e-01 100.0% 72.5%
5nfiB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 48.0 4.40e-01 100.0% 71.4%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.56 44.0 3.76e-01 87.4% 73.9%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 50.0 4.67e-01 100.0% 95.0%
3v98B01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.54 48.0 4.50e-01 100.0% 92.3%
3wi7A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 35.0 2.46e-01 95.8% 21.6%
2jbwA02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 34.0 2.47e-01 91.6% 24.6%
3oc5A02 2.60.40.3240 Mainly Beta › Sandwich › Immunoglobulin-like › Vibrio cholerae toxin co-regulated pilus biosynthesis protein F, C-terminal domain 0.52 44.0 3.85e-01 91.6% 63.1%
3qldA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 39.0 3.28e-01 77.9% 99.3%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.52 37.0 3.17e-01 94.7% 46.7%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.50 30.0 3.12e-01 100.0% 63.1%
4f0jA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 37.0 2.57e-01 97.9% 23.7%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5049927 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 55.0 5.10e-01 93.7% 67.5%
5058314 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 49.0 4.81e-01 75.8% 71.0%
5053095 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 53.0 4.99e-01 93.7% 71.3%
4936907 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 46.0 4.40e-01 97.9% 61.8%
5005735 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 47.0 4.82e-01 74.7% 81.1%
4255610 11.1.1.154 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S 0.63 51.0 3.98e-01 89.5% 75.7%
1495266 12.1.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_42C 0.62 42.0 4.76e-01 98.9% 95.6%
4013242 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.82e-01 97.9% 73.9%
3245905 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.62 50.0 4.75e-01 91.6% 73.0%
4944012 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 55.0 5.24e-01 98.9% 94.5%
4115931 12.1.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_42C 0.61 40.0 4.66e-01 97.9% 96.9%
3735427 11.1.1.545 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chromosome_seg 0.60 54.0 4.47e-01 100.0% 82.1%
3264429 11.1.1.801 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.60 46.0 4.11e-01 84.2% 77.1%
3385240 11.1.1.545 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chromosome_seg 0.60 53.0 4.97e-01 100.0% 100.0%
3460166 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.91e-01 98.9% 100.0%
3265117 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 43.0 4.04e-01 84.2% 63.5%
3275822 11.1.1.214 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N 0.59 46.0 4.45e-01 88.4% 75.2%
5056309 70.2.1.5 ↗ beta barrels › beta-clip › dUTPase-like › dUTPase-like › DCD 0.58 42.0 3.56e-01 76.8% 75.0%
3234434 1.1.5.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.57 49.0 3.64e-01 100.0% 41.5%
3508294 10.32.1.196 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD 0.54 44.0 3.56e-01 90.5% 50.8%
1569520 2003.1.5.151 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 0.54 32.0 2.41e-01 100.0% 21.1%
4010371 295.1.1.45 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF30238 0.53 37.0 3.75e-01 72.6% 100.0%
3759361 5095.1.1.0 ↗ beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen 0.53 47.0 3.78e-01 97.9% 78.9%
3690019 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.90e-01 90.5% 66.7%
3522169 11.1.4.100 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CILP_8th 0.52 45.0 3.80e-01 97.9% 87.1%
3293728 10.10.1.4 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › ATS3 0.52 45.0 4.39e-01 95.8% 97.1%
3598645 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.52 45.0 2.98e-01 100.0% 22.9%
4958402 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.52 41.0 2.94e-01 95.8% 28.3%
3696965 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 43.0 3.63e-01 98.9% 72.2%
3228682 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.51 40.0 3.65e-01 88.4% 72.6%
3925634 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.50 35.0 4.01e-01 75.8% 100.0%
3553055 10.32.1.196 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › WLS_GOLD 0.50 43.0 3.58e-01 98.9% 68.1%
3562436 11.1.1.1116 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CILP_8th 0.50 44.0 3.68e-01 100.0% 82.9%
4464084 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.50 39.0 3.09e-01 85.3% 91.1%
3278636 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.50 44.0 3.78e-01 98.9% 76.8%
3787756 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.50 43.0 3.75e-01 100.0% 91.8%
4032554 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.50 42.0 3.50e-01 91.6% 74.5%