Back to structures

OQ504958.1__WID41926.1__X__00008

Bact-Vir

OQ504958.1__WID41926.1__X__00008

Identity

Accession:
OQ504958 ↗
Kingdom:
phage

Quality

90.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-88
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10109.16 best Phage_TAC_7 34.6 2.20e-08 97.7% 88.6%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sseB00 1.10.238.100 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › YAP1 redox domain. Chain B 0.54 32.0 3.23e-01 70.9% 57.0%
1qoyA00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.50 41.0 2.95e-01 95.3% 93.1%
2of3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 38.0 2.75e-01 82.6% 48.5%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3945607 3547.1.1.2 a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › Phage_TAC_7 0.81 72.0 7.26e-01 100.0% 96.5%
3165359 105.1.1.0 alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain 0.64 39.0 3.69e-01 70.9% 52.0%
5039318 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.60 41.0 2.83e-01 70.9% 32.0%
3271029 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.57 50.0 3.49e-01 100.0% 49.5%
4947317 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.56 43.0 3.20e-01 84.9% 42.4%
3245774 7525.1.1.2 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 0.54 38.0 2.50e-01 73.3% 36.0%
3056282 314.1.1.11 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta 0.54 37.0 2.63e-01 70.9% 65.8%
4780493 3293.1.1.1 beta barrels › LARA domain › LARA domain › LARA domain › LARA_dom 0.51 40.0 4.31e-01 89.5% 98.6%
163699 109.4.1.266 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › XMAP215_CLASP_TOG 0.50 38.0 2.75e-01 82.6% 48.5%