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OQ504960.1__WID42010.1__X__00038
Bact-VirOQ504960.1__WID42010.1__X__00038
Identity
- Accession:
- OQ504960 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
TaxID: 3032261
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-76
Domain cluster:
rep: OM735687.1__UNY50260.1__X__00039__D3-67
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dn7A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 44.0 | 3.72e-01 | 100.0% | 40.2% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 51.0 | 4.67e-01 | 100.0% | 65.1% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.65 | 43.0 | 4.33e-01 | 100.0% | 68.2% |
| 3afoB02 | 2.60.200.30 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 | 0.63 | 56.0 | 4.43e-01 | 100.0% | 97.8% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 50.0 | 4.67e-01 | 100.0% | 68.7% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 41.0 | 3.76e-01 | 100.0% | 48.9% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 41.0 | 3.41e-01 | 71.2% | 66.7% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.58 | 40.0 | 3.33e-01 | 71.2% | 81.1% |
| 2xqyA03 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.57 | 41.0 | 3.28e-01 | 100.0% | 37.6% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.57 | 46.0 | 4.32e-01 | 93.9% | 90.6% |
| 4jj0B00 | 2.30.42.60 | Mainly Beta › Roll › Pdz3 Domain › | 0.57 | 47.0 | 3.59e-01 | 100.0% | 58.9% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 45.0 | 4.29e-01 | 93.9% | 90.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 41.0 | 3.72e-01 | 100.0% | 56.5% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 44.0 | 3.02e-01 | 86.4% | 45.8% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.90e-01 | 83.3% | 94.4% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 43.0 | 3.78e-01 | 87.9% | 85.7% |
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.55 | 46.0 | 4.21e-01 | 100.0% | 89.4% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 39.0 | 3.51e-01 | 74.2% | 70.3% |
| 3volA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.47e-01 | 87.9% | 66.7% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 49.0 | 4.48e-01 | 100.0% | 93.1% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 39.0 | 2.65e-01 | 77.3% | 46.9% |
| 2qkpD00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 42.0 | 3.50e-01 | 89.4% | 67.9% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 42.0 | 3.40e-01 | 86.4% | 55.2% |
| 1sq2N00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.38e-01 | 100.0% | 47.3% |
| 2hv2A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 41.0 | 3.72e-01 | 86.4% | 80.0% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 43.0 | 3.19e-01 | 90.9% | 83.3% |
| 1u0kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 43.0 | 3.66e-01 | 100.0% | 95.5% |
| 4bwxA03 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.77e-01 | 81.8% | 83.7% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.90e-01 | 98.5% | 89.5% |
| 2e55A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 36.0 | 2.64e-01 | 72.7% | 92.8% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 37.0 | 2.57e-01 | 77.3% | 69.8% |
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.53 | 44.0 | 3.89e-01 | 100.0% | 67.9% |
| 2b5iC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 36.0 | 3.28e-01 | 100.0% | 52.1% |
| 4ivkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 44.0 | 2.74e-01 | 100.0% | 76.2% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 33.0 | 2.72e-01 | 89.4% | 29.7% |
| 2dewX03 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.51 | 37.0 | 2.36e-01 | 77.3% | 93.5% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.51 | 41.0 | 2.65e-01 | 92.4% | 86.3% |
| 4bwsF00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.51 | 42.0 | 4.27e-01 | 98.5% | 92.5% |
| 2qnuA00 | 3.40.1730.10 | Alpha Beta › 3-Layer(aba) Sandwich › pa0076 fold › pa0076 domain | 0.51 | 40.0 | 2.91e-01 | 89.4% | 39.3% |
| 4x83A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.24e-01 | 78.8% | 82.4% |
| 4czwA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 36.0 | 2.32e-01 | 78.8% | 93.9% |
| 2o6cA00 | 2.60.40.2480 | Mainly Beta › Sandwich › Immunoglobulin-like › Periplasmic metal-binding protein Tp34-type | 0.50 | 42.0 | 3.25e-01 | 95.5% | 59.5% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 38.0 | 2.92e-01 | 83.3% | 59.0% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.50 | 38.0 | 3.80e-01 | 98.5% | 83.6% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 35.0 | 2.53e-01 | 74.2% | 87.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4231372 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.80 | 72.0 | 7.12e-01 | 100.0% | 98.6% |
| 4147528 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.76 | 67.0 | 6.62e-01 | 100.0% | 100.0% |
| 5017559 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 66.0 | 6.69e-01 | 98.5% | 100.0% |
| 3907235 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.71 | 42.0 | 2.84e-01 | 97.0% | 17.3% |
| 3495764 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.69 | 40.0 | 2.90e-01 | 97.0% | 21.1% |
| 3258276 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.68 | 42.0 | 2.83e-01 | 98.5% | 18.2% |
| 4559371 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 5.16e-01 | 98.5% | 84.1% |
| 4046575 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.66 | 40.0 | 3.35e-01 | 89.4% | 35.7% |
| 3993677 | 823.1.1.0 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW | 0.64 | 47.0 | 4.62e-01 | 100.0% | 74.3% |
| 3598125 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.58e-01 | 98.5% | 72.0% |
| 4322608 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.62 | 45.0 | 4.20e-01 | 78.8% | 100.0% |
| 3277086 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 3.92e-01 | 77.3% | 88.4% |
| 3525928 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.60 | 40.0 | 3.22e-01 | 71.2% | 37.1% |
| 4270910 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.60 | 46.0 | 4.60e-01 | 98.5% | 80.0% |
| 4547801 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 43.0 | 3.99e-01 | 98.5% | 58.9% |
| 5051418 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.59 | 47.0 | 3.93e-01 | 97.0% | 91.9% |
| 4087011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 50.0 | 4.51e-01 | 98.5% | 68.4% |
| 4212763 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.58 | 42.0 | 3.92e-01 | 78.8% | 100.0% |
| 5078886 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 42.0 | 3.60e-01 | 80.3% | 71.8% |
| 4588679 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.56 | 44.0 | 3.06e-01 | 87.9% | 58.0% |
| 3281945 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 48.0 | 4.31e-01 | 100.0% | 68.9% |
| 4974146 | 75.1.1.0 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like | 0.56 | 49.0 | 3.80e-01 | 100.0% | 98.7% |
| 1565241 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.56 | 33.0 | 3.84e-01 | 90.9% | 84.4% |
| 5053160 | 3740.1.1.3 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N | 0.55 | 39.0 | 2.85e-01 | 95.5% | 25.5% |
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.54 | 43.0 | 2.86e-01 | 90.9% | 22.3% |
| 4989946 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.54 | 36.0 | 3.08e-01 | 95.5% | 41.8% |
| 3611538 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 36.0 | 3.79e-01 | 71.2% | 100.0% |
| 3219903 | 304.9.1.81 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RBD_AKAP-17A | 0.53 | 46.0 | 4.12e-01 | 98.5% | 95.8% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 4.00e-01 | 98.5% | 78.4% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.52 | 45.0 | 4.05e-01 | 100.0% | 87.4% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 40.0 | 3.94e-01 | 98.5% | 78.4% |
| 3231161 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.50 | 41.0 | 2.37e-01 | 97.0% | 57.9% |
| 4024621 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.50 | 37.0 | 2.83e-01 | 78.8% | 81.6% |
| 3508353 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.50 | 40.0 | 2.79e-01 | 92.4% | 84.0% |