←Back to structures
OQ504961.1__WID42076.1__X__00014
Bact-VirOQ504961.1__WID42076.1__X__00014
Identity
- Accession:
- OQ504961 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-108
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dk4B00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.84 | 79.0 | 6.06e-01 | 100.0% | 64.1% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.84 | 58.0 | 5.63e-01 | 70.5% | 74.3% |
| 1w2yA00 | 1.10.4010.10 | Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase | 0.78 | 73.0 | 5.56e-01 | 100.0% | 75.2% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.76 | 55.0 | 5.09e-01 | 75.2% | 62.1% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.76 | 53.0 | 5.35e-01 | 72.4% | 77.4% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.74 | 53.0 | 5.92e-01 | 77.1% | 93.9% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.72 | 55.0 | 4.88e-01 | 78.1% | 86.0% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.71 | 49.0 | 4.58e-01 | 71.4% | 80.2% |
| 1tdpA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.70 | 49.0 | 4.88e-01 | 73.3% | 73.0% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.69 | 53.0 | 5.43e-01 | 81.9% | 94.2% |
| 2etdA00 | 1.20.1440.20 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain | 0.69 | 52.0 | 4.67e-01 | 78.1% | 73.0% |
| 2dbaA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 42.0 | 4.06e-01 | 81.0% | 54.2% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 46.0 | 4.76e-01 | 70.5% | 81.0% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 46.0 | 5.09e-01 | 73.3% | 87.4% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.66 | 52.0 | 4.58e-01 | 87.6% | 87.1% |
| 3qc1A01 | 1.25.40.540 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family | 0.63 | 53.0 | 4.72e-01 | 91.4% | 78.8% |
| 6humG01 | 1.20.120.1200 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ | 0.63 | 43.0 | 3.81e-01 | 71.4% | 46.9% |
| 2or0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.62 | 48.0 | 3.94e-01 | 81.0% | 55.9% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 47.0 | 4.27e-01 | 81.0% | 78.2% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 48.0 | 4.15e-01 | 85.7% | 84.9% |
| 1k3kA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.61 | 53.0 | 4.80e-01 | 99.0% | 91.1% |
| 4doyA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 43.0 | 3.62e-01 | 75.2% | 62.8% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 43.0 | 4.21e-01 | 75.2% | 85.1% |
| 3pjaJ01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.59 | 46.0 | 4.26e-01 | 82.9% | 72.5% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.59 | 42.0 | 3.91e-01 | 73.3% | 99.2% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 42.0 | 4.46e-01 | 81.9% | 82.1% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 40.0 | 4.19e-01 | 72.4% | 77.1% |
| 4g10A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 42.0 | 3.91e-01 | 77.1% | 74.3% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 43.0 | 4.28e-01 | 80.0% | 85.3% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.57 | 41.0 | 4.04e-01 | 76.2% | 80.5% |
| 1e3mB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.56 | 40.0 | 3.55e-01 | 74.3% | 52.0% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.56 | 39.0 | 3.76e-01 | 71.4% | 65.3% |
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.56 | 42.0 | 3.23e-01 | 80.0% | 83.5% |
| 2zy9A03 | 1.10.357.20 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › SLC41 divalent cation transporters, integral membrane domain | 0.53 | 42.0 | 3.61e-01 | 85.7% | 87.4% |
| 1o0sA02 | 1.20.1370.30 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.52 | 43.0 | 4.34e-01 | 91.4% | 92.6% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.52 | 42.0 | 3.02e-01 | 83.8% | 77.1% |
| 4bemJ00 | 1.20.120.610 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase | 0.52 | 42.0 | 3.46e-01 | 84.8% | 71.3% |
| 7cfmR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 44.0 | 3.34e-01 | 94.3% | 79.5% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.50 | 45.0 | 3.76e-01 | 95.2% | 89.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045256 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.82 | 57.0 | 6.03e-01 | 71.4% | 96.8% |
| 3998213 | 109.4.1.1264 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 | 0.76 | 51.0 | 3.64e-01 | 71.4% | 25.3% |
| 3646344 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.74 | 52.0 | 4.12e-01 | 72.4% | 44.3% |
| 4969435 | 633.5.1.1 ↗ | alpha bundles › Bromodomain-like › LemA-like › LemA-like › LemA | 0.73 | 53.0 | 4.49e-01 | 76.2% | 67.6% |
| 3167156 | 109.4.1.255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_22 | 0.70 | 55.0 | 4.58e-01 | 82.9% | 57.8% |
| 3183000 | 109.4.1.3568 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16, TPR_22 | 0.70 | 55.0 | 3.98e-01 | 82.9% | 35.4% |
| 3291051 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 59.0 | 4.02e-01 | 90.5% | 46.4% |
| 3633170 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.70 | 51.0 | 4.90e-01 | 76.2% | 77.5% |
| 3742906 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.70 | 51.0 | 4.84e-01 | 76.2% | 74.4% |
| 4950308 | 3843.1.1.2 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF2108 | 0.70 | 43.0 | 5.08e-01 | 72.4% | 88.0% |
| 4565029 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.69 | 52.0 | 4.14e-01 | 78.1% | 49.0% |
| 3465983 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.69 | 52.0 | 4.69e-01 | 79.0% | 72.1% |
| 4944089 | 3579.1.1.0 ↗ | extended segments › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J › NADH-quinone oxidoreductase subunit J | 0.68 | 46.0 | 3.83e-01 | 70.5% | 41.1% |
| 5020587 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.68 | 57.0 | 4.23e-01 | 90.5% | 68.3% |
| 4683274 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.68 | 47.0 | 5.43e-01 | 74.3% | 93.8% |
| 4020089 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.67 | 50.0 | 4.51e-01 | 77.1% | 67.1% |
| 4490049 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.67 | 48.0 | 5.22e-01 | 76.2% | 86.7% |
| 3931307 | 601.1.2.4 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_R4 | 0.66 | 48.0 | 4.31e-01 | 75.2% | 68.3% |
| 4952624 | 3843.1.1.29 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF2105 | 0.65 | 46.0 | 5.05e-01 | 78.1% | 89.4% |
| 3495096 | 11.2.1.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin | 0.65 | 46.0 | 3.67e-01 | 73.3% | 75.4% |
| 4379577 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.65 | 46.0 | 4.54e-01 | 72.4% | 75.5% |
| 3781941 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.64 | 48.0 | 3.80e-01 | 81.9% | 38.6% |
| 3598745 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 49.0 | 4.31e-01 | 83.8% | 54.8% |
| 4944098 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.63 | 46.0 | 4.76e-01 | 76.2% | 79.0% |
| 4991645 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.63 | 43.0 | 4.64e-01 | 73.3% | 81.1% |
| 5077144 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.62 | 48.0 | 3.90e-01 | 81.9% | 74.1% |
| 4382712 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.62 | 49.0 | 3.92e-01 | 83.8% | 54.2% |
| 3971997 | 3890.1.1.0 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins | 0.62 | 52.0 | 4.21e-01 | 92.4% | 89.8% |
| 3610711 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 52.0 | 4.22e-01 | 90.5% | 81.1% |
| 3626961 | 3890.1.1.1 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I | 0.61 | 52.0 | 4.03e-01 | 92.4% | 45.7% |
| 4947493 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.61 | 44.0 | 4.09e-01 | 81.9% | 59.3% |
| 4941521 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.60 | 46.0 | 4.86e-01 | 80.0% | 93.7% |
| 3240519 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 3.61e-01 | 91.4% | 75.2% |
| 3539434 | 633.21.1.40 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › AGMP_C | 0.58 | 41.0 | 3.59e-01 | 74.3% | 48.5% |
| 3460645 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.57 | 45.0 | 3.00e-01 | 81.9% | 48.2% |
| 3447427 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.57 | 41.0 | 3.80e-01 | 76.2% | 62.1% |
| 3207445 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.55 | 45.0 | 4.18e-01 | 90.5% | 72.6% |
| 3737705 | 605.4.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF202 | 0.55 | 43.0 | 4.40e-01 | 81.0% | 86.0% |
| 3291616 | 1075.5.1.8 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 | 0.53 | 42.0 | 3.47e-01 | 89.5% | 78.1% |
| 3668467 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 41.0 | 3.28e-01 | 87.6% | 55.2% |
| 3182665 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.51 | 36.0 | 3.84e-01 | 82.9% | 82.1% |
| 5035870 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.50 | 36.0 | 3.63e-01 | 87.6% | 74.3% |
D2
medium
residues 112-181
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4L01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.70 | 47.0 | 3.77e-01 | 70.0% | 72.6% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 49.0 | 4.50e-01 | 82.9% | 65.2% |
| 2qvpC00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.63 | 53.0 | 3.61e-01 | 95.7% | 72.1% |
| 6zepA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 51.0 | 3.34e-01 | 95.7% | 63.2% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 45.0 | 4.43e-01 | 81.4% | 86.8% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 41.0 | 2.66e-01 | 72.9% | 88.0% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 44.0 | 4.01e-01 | 81.4% | 84.4% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 46.0 | 3.66e-01 | 85.7% | 47.9% |
| 6s6yD02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 48.0 | 3.87e-01 | 97.1% | 70.9% |
| 3qh4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 43.0 | 2.95e-01 | 87.1% | 74.2% |
| 3zi1A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 41.0 | 3.30e-01 | 90.0% | 37.9% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 37.0 | 3.01e-01 | 70.0% | 66.9% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 46.0 | 3.26e-01 | 92.9% | 70.3% |
| 2o3oA01 | 2.40.128.690 | Mainly Beta › Beta Barrel › Lipocalin › YycH protein, domain 3-like | 0.54 | 37.0 | 3.16e-01 | 72.9% | 53.7% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.77e-01 | 80.0% | 72.8% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.53 | 40.0 | 3.60e-01 | 81.4% | 82.8% |
| 4xrtA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 39.0 | 3.23e-01 | 81.4% | 79.6% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.53 | 37.0 | 3.39e-01 | 72.9% | 84.8% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 40.0 | 3.67e-01 | 81.4% | 77.7% |
| 4gs5A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 40.0 | 3.56e-01 | 82.9% | 64.8% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 38.0 | 3.35e-01 | 80.0% | 66.7% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.53 | 39.0 | 3.72e-01 | 84.3% | 68.9% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 44.0 | 3.57e-01 | 98.6% | 85.5% |
| 4k59A00 | 2.60.40.4380 | Mainly Beta › Sandwich › Immunoglobulin-like › Translational regulator CsrA | 0.51 | 38.0 | 3.96e-01 | 81.4% | 89.4% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3927151 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 48.0 | 3.41e-01 | 77.1% | 28.0% |
| 4044550 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.63 | 48.0 | 4.64e-01 | 82.9% | 73.8% |
| 5013331 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.62 | 47.0 | 4.91e-01 | 82.9% | 95.4% |
| 3492934 | 312.1.1.19 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 | 0.62 | 46.0 | 3.58e-01 | 80.0% | 76.1% |
| 5011969 | 304.115.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase | 0.61 | 42.0 | 4.47e-01 | 82.9% | 83.3% |
| 4982476 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.61 | 46.0 | 4.89e-01 | 84.3% | 93.3% |
| 3488565 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.61 | 44.0 | 3.44e-01 | 77.1% | 100.0% |
| 2325417 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.61 | 46.0 | 4.37e-01 | 82.9% | 72.4% |
| 3408936 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 43.0 | 4.05e-01 | 77.1% | 63.3% |
| 3808873 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.60 | 44.0 | 3.69e-01 | 80.0% | 84.8% |
| 3613887 | 2011.1.1.17 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 | 0.59 | 49.0 | 3.09e-01 | 92.9% | 73.1% |
| 3498911 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 46.0 | 4.12e-01 | 84.3% | 87.8% |
| 5066425 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.59 | 46.0 | 4.40e-01 | 84.3% | 72.5% |
| 3578149 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.59 | 42.0 | 3.41e-01 | 77.1% | 40.7% |
| 3593576 | 2011.1.1.17 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 | 0.59 | 49.0 | 3.23e-01 | 97.1% | 67.6% |
| 3731765 | 304.8.1.83 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF25904 | 0.59 | 45.0 | 4.19e-01 | 84.3% | 91.1% |
| 4972821 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.58 | 42.0 | 3.60e-01 | 77.1% | 65.0% |
| 4956709 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.58 | 47.0 | 4.22e-01 | 87.1% | 82.1% |
| 4010978 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 44.0 | 3.80e-01 | 81.4% | 82.7% |
| 4170819 | 4070.1.1.3 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › DUF3267 | 0.58 | 50.0 | 3.66e-01 | 97.1% | 90.0% |
| 3989826 | 213.1.1.7 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB | 0.57 | 46.0 | 3.74e-01 | 92.9% | 76.0% |
| 4992518 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 43.0 | 3.34e-01 | 81.4% | 45.0% |
| 4379266 | 316.1.1.1 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PolyA_pol | 0.57 | 48.0 | 3.76e-01 | 100.0% | 64.1% |
| 3633647 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.56 | 35.0 | 3.62e-01 | 70.0% | 64.6% |
| 3257782 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 44.0 | 4.08e-01 | 85.7% | 74.2% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 40.0 | 3.96e-01 | 77.1% | 90.7% |
| 3399905 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.55 | 42.0 | 2.83e-01 | 87.1% | 84.4% |
| 3271023 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.55 | 42.0 | 3.31e-01 | 88.6% | 75.0% |
| 3761570 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.54 | 36.0 | 3.18e-01 | 71.4% | 60.0% |
| 185414 | 3347.1.1.1 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 | 0.53 | 36.0 | 2.96e-01 | 70.0% | 66.7% |
| 3995145 | 316.1.1.10 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap | 0.53 | 45.0 | 3.09e-01 | 97.1% | 55.7% |
| 4611994 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.53 | 44.0 | 3.21e-01 | 97.1% | 76.6% |
| 3837628 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 40.0 | 3.22e-01 | 87.1% | 73.8% |
| 4927275 | 211.1.1.24 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Ble-like_N | 0.52 | 43.0 | 3.68e-01 | 98.6% | 83.1% |
| 3940530 | 7579.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase | 0.52 | 41.0 | 2.51e-01 | 90.0% | 66.7% |
| 5055184 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.50 | 38.0 | 3.60e-01 | 81.4% | 85.9% |
| 3709807 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.50 | 42.0 | 2.79e-01 | 100.0% | 87.9% |
| 3387016 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 38.0 | 3.17e-01 | 84.3% | 77.0% |