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OQ504984.1__WLW37940.1__X__00061
Bact-VirOQ504984.1__WLW37940.1__X__00061
Identity
- Accession:
- OQ504984 ↗
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Kanaloavirus›
Synechococcus_phage_S-8S56
TaxID: 3038208
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-39_119-169
Domain cluster:
rep: OQ401623.1__WED25068.1__CRP901_gp49__00049__D1-35_105-144
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3efeC00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.62 | 49.0 | 3.81e-01 | 86.5% | 92.2% |
| 1dekA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 45.0 | 4.16e-01 | 77.5% | 98.3% |
| 2ayxA01 | 3.40.50.10970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 48.0 | 4.47e-01 | 84.3% | 89.5% |
| 3gxbA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.62 | 45.0 | 3.61e-01 | 76.4% | 97.7% |
| 3a00A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 44.0 | 4.43e-01 | 77.5% | 95.7% |
| 4ls9B01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.61 | 50.0 | 4.02e-01 | 95.5% | 90.3% |
| 2ayzA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 42.0 | 3.75e-01 | 76.4% | 87.2% |
| 4cu5A00 | 3.40.50.12090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 42.0 | 4.29e-01 | 76.4% | 96.5% |
| 4eukA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 42.0 | 3.69e-01 | 76.4% | 97.8% |
| 3rcnA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.56 | 42.0 | 3.74e-01 | 79.8% | 67.2% |
| 4cr6A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 43.0 | 3.15e-01 | 85.4% | 92.2% |
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 39.0 | 3.34e-01 | 77.5% | 97.3% |
| 2qxyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 39.0 | 3.58e-01 | 76.4% | 97.5% |
| 1wcwA01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.52e-01 | 77.5% | 95.2% |
| 2jbvB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 39.0 | 3.00e-01 | 79.8% | 94.7% |
| 4o1hA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 38.0 | 3.52e-01 | 77.5% | 95.0% |
| 2h6eA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 3.51e-01 | 85.4% | 100.0% |
| 2o3rA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 42.0 | 3.78e-01 | 92.1% | 91.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3903035 | 2004.1.1.285 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gal-3-0_sulfotr | 0.76 | 67.0 | 4.38e-01 | 96.6% | 78.6% |
| 3572281 | 2004.1.1.285 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gal-3-0_sulfotr | 0.76 | 67.0 | 4.47e-01 | 96.6% | 85.7% |
| 5022648 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.66 | 46.0 | 4.23e-01 | 73.0% | 96.7% |
| 3696918 | 2003.1.1.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 | 0.57 | 44.0 | 3.45e-01 | 84.3% | 91.2% |
| 2568308 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.57 | 41.0 | 3.73e-01 | 76.4% | 91.0% |
| 3736804 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.57 | 43.0 | 3.60e-01 | 82.0% | 74.4% |
| 3979655 | 2007.1.3.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › OKR_DC_1_N | 0.57 | 42.0 | 4.06e-01 | 78.7% | 97.0% |
| 5038975 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.55 | 43.0 | 3.41e-01 | 85.4% | 81.0% |
| 4967807 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.52 | 41.0 | 3.54e-01 | 91.0% | 88.4% |
D2
high
residues 41-118_177-227
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lpxA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.51 | 33.0 | 3.65e-01 | 90.7% | 82.5% |