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OQ507916.1__WEU68178.1__X__00002

Bact-Vir

OQ507916.1__WEU68178.1__X__00002

Identity

Accession:
OQ507916 ↗
Kingdom:
phage

Quality

79.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarkviridae› Jerseyvirus› Salmonella_phage_ZCSE7

TaxID: 3032369

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-61
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 45.0 3.80e-01 78.7% 52.3%
2rk9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.61 40.0 3.33e-01 98.4% 35.0%
3ttyA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 29.0 2.97e-01 70.5% 43.5%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 44.0 3.74e-01 80.3% 53.8%
5e9aB03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 29.0 2.90e-01 70.5% 43.5%
4m4xA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 48.0 3.89e-01 96.7% 83.3%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.57 48.0 4.27e-01 100.0% 66.7%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 40.0 3.41e-01 78.7% 92.8%
1qlmA02 3.30.1030.10 Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 0.55 44.0 3.17e-01 91.8% 59.1%
1tkjA00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 42.0 2.79e-01 86.9% 94.6%
1sqiA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 35.0 2.67e-01 95.1% 24.6%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.53 35.0 2.50e-01 95.1% 19.6%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 42.0 3.27e-01 91.8% 37.2%
2el8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 35.0 3.19e-01 93.4% 50.5%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.51 38.0 3.06e-01 86.9% 55.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 32.0 3.16e-01 95.1% 56.3%
2iuwA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.50 42.0 3.04e-01 100.0% 84.4%
1dleB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 42.0 3.30e-01 98.4% 68.3%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3429465 4.1.1.173 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4216 0.70 57.0 4.27e-01 91.8% 42.6%
4952430 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 58.0 4.78e-01 100.0% 55.5%
3258054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 3.74e-01 83.6% 50.3%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 47.0 4.69e-01 100.0% 81.5%
4975578 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.61 51.0 3.41e-01 98.4% 51.6%
3989498 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.61 43.0 4.06e-01 100.0% 60.8%
3219406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 43.0 4.61e-01 95.1% 96.0%
3936498 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.59 45.0 3.59e-01 86.9% 87.4%
4626792 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.58 43.0 3.36e-01 80.3% 48.3%
4316087 230.2.1.0 ↗ a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C 0.58 48.0 4.01e-01 100.0% 91.7%
3537588 331.17.1.1 ↗ a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.57 45.0 3.40e-01 91.8% 45.7%
3881192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 3.62e-01 100.0% 46.5%
4659912 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.56 41.0 2.50e-01 78.7% 19.0%
3597646 331.17.1.0 ↗ a+b two layers › TBP-like › Atp11 › Atp11 0.55 43.0 3.26e-01 91.8% 45.7%
3709607 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.55 41.0 3.06e-01 83.6% 39.4%
3515407 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.54 39.0 3.01e-01 82.0% 42.9%
3482706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 3.30e-01 95.1% 40.0%
3962258 206.1.3.27 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CP_ATPgrasp_2 0.54 40.0 3.10e-01 83.6% 78.7%
4028807 316.1.1.36 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central 0.53 37.0 3.02e-01 96.7% 38.3%
4586503 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 38.0 3.11e-01 82.0% 94.8%
3823190 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.53 41.0 3.21e-01 96.7% 35.6%
3448643 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.53 43.0 3.03e-01 96.7% 27.8%
3817420 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 38.0 2.90e-01 83.6% 38.9%
3258204 331.17.1.1 ↗ a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.52 42.0 3.21e-01 96.7% 55.3%
5032539 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 3.65e-01 78.7% 73.8%
3991902 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 38.0 3.26e-01 83.6% 60.9%
3990696 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.52 41.0 2.95e-01 90.2% 28.0%
3702518 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 37.0 3.14e-01 78.7% 99.1%
3962549 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 32.0 2.48e-01 78.7% 26.0%
5042935 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.51 40.0 3.58e-01 91.8% 97.9%
4044404 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.51 36.0 3.15e-01 78.7% 96.2%
3058418 1.1.13.2 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.51 43.0 3.71e-01 98.4% 97.1%
4029228 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 37.0 2.77e-01 83.6% 34.2%
3579212 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.51 42.0 3.63e-01 98.4% 100.0%
1758564 69.1.1.2 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.51 39.0 2.88e-01 86.9% 37.4%
D2 medium residues 69-100
PDB
Domain cluster: representative