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OQ508957.1__WGH49736.1__X__00020
Bact-VirOQ508957.1__WGH49736.1__X__00020
Identity
- Accession:
- OQ508957 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
TaxID: 3038239
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-63
D2
high
residues 67-133
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.77 | 53.0 | 4.92e-01 | 71.6% | 97.6% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.70 | 52.0 | 4.63e-01 | 79.1% | 100.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.68 | 47.0 | 4.78e-01 | 76.1% | 74.2% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 44.0 | 3.66e-01 | 73.1% | 55.5% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 37.0 | 3.89e-01 | 97.0% | 65.0% |
| 2ichA02 | 2.40.370.10 | Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain | 0.63 | 43.0 | 3.50e-01 | 71.6% | 94.6% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 46.0 | 4.38e-01 | 80.6% | 95.1% |
| 3hm4A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.61 | 48.0 | 3.85e-01 | 91.0% | 73.2% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.61 | 51.0 | 3.65e-01 | 100.0% | 60.7% |
| 1vw4U00 | 3.30.1390.20 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L30/L7 | 0.61 | 47.0 | 4.43e-01 | 85.1% | 82.9% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 37.0 | 3.71e-01 | 98.5% | 57.7% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 42.0 | 3.78e-01 | 74.6% | 61.5% |
| 3bgyA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.59 | 44.0 | 3.11e-01 | 80.6% | 53.1% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 35.0 | 3.34e-01 | 97.0% | 48.8% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 35.0 | 3.41e-01 | 94.0% | 53.4% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.58 | 50.0 | 4.55e-01 | 97.0% | 91.1% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 41.0 | 3.54e-01 | 74.6% | 58.7% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.57 | 49.0 | 4.56e-01 | 97.0% | 100.0% |
| 4ls9B02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.57 | 42.0 | 3.55e-01 | 82.1% | 81.3% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.56 | 39.0 | 2.94e-01 | 73.1% | 60.5% |
| 2rinA02 | 3.40.190.100 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 | 0.56 | 40.0 | 3.49e-01 | 77.6% | 56.4% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 39.0 | 3.40e-01 | 76.1% | 53.2% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 38.0 | 3.20e-01 | 76.1% | 44.1% |
| 6dxwA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.54 | 40.0 | 2.86e-01 | 82.1% | 71.6% |
| 2o5nA02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.53 | 40.0 | 3.01e-01 | 79.1% | 93.6% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.52 | 38.0 | 2.29e-01 | 100.0% | 11.7% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 37.0 | 3.55e-01 | 79.1% | 90.1% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.70 | 49.0 | 4.76e-01 | 74.6% | 100.0% |
| 5026235 | 304.165.1.5 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_A0563_N | 0.69 | 50.0 | 3.87e-01 | 76.1% | 99.3% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.68 | 45.0 | 5.03e-01 | 73.1% | 92.0% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.67 | 44.0 | 5.04e-01 | 71.6% | 100.0% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.66 | 43.0 | 4.93e-01 | 71.6% | 100.0% |
| 3221153 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.66 | 45.0 | 3.26e-01 | 70.1% | 71.4% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 45.0 | 5.00e-01 | 73.1% | 100.0% |
| 3968122 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.65 | 42.0 | 4.77e-01 | 70.1% | 97.8% |
| 3797697 | 9.15.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 | 0.65 | 45.0 | 3.31e-01 | 73.1% | 70.4% |
| 4394754 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.65 | 47.0 | 4.33e-01 | 79.1% | 83.3% |
| 5081502 | 4252.1.1.1 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › CrtC | 0.65 | 44.0 | 3.45e-01 | 70.1% | 97.9% |
| 3750158 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.64 | 44.0 | 3.24e-01 | 71.6% | 67.4% |
| 3432908 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.63 | 47.0 | 2.98e-01 | 80.6% | 99.1% |
| 5045395 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.62 | 50.0 | 4.34e-01 | 91.0% | 64.2% |
| 3649276 | 887.1.1.0 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e | 0.62 | 49.0 | 4.13e-01 | 89.6% | 99.2% |
| 3626327 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.61 | 48.0 | 4.47e-01 | 95.5% | 68.2% |
| 3308935 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.60 | 46.0 | 2.94e-01 | 83.6% | 98.2% |
| 3786945 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.60 | 47.0 | 4.25e-01 | 95.5% | 62.1% |
| 3242794 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.59 | 42.0 | 3.50e-01 | 73.1% | 100.0% |
| 4633704 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.59 | 49.0 | 4.51e-01 | 94.0% | 97.8% |
| 4038267 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.59 | 50.0 | 4.44e-01 | 95.5% | 89.9% |
| 3509389 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.59 | 40.0 | 3.22e-01 | 70.1% | 71.5% |
| 3392995 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.59 | 51.0 | 4.69e-01 | 95.5% | 97.6% |
| 3185862 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.59 | 49.0 | 4.15e-01 | 97.0% | 79.2% |
| 3198688 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.58 | 50.0 | 4.52e-01 | 95.5% | 98.9% |
| 4174474 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.58 | 49.0 | 4.52e-01 | 95.5% | 97.8% |
| 4487057 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.57 | 49.0 | 4.47e-01 | 95.5% | 95.6% |
| 3218109 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.57 | 46.0 | 4.30e-01 | 95.5% | 70.0% |
| 4083103 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.57 | 39.0 | 3.33e-01 | 74.6% | 48.8% |
| 4942439 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.57 | 40.0 | 3.19e-01 | 74.6% | 97.9% |
| 3503254 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.56 | 47.0 | 4.42e-01 | 95.5% | 100.0% |
| 4289852 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.56 | 44.0 | 4.15e-01 | 89.6% | 100.0% |
| 2458553 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 38.0 | 3.01e-01 | 73.1% | 66.9% |
| 4327417 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.55 | 38.0 | 3.31e-01 | 74.6% | 50.4% |
| 4313699 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.55 | 45.0 | 3.98e-01 | 95.5% | 81.0% |
| 4120969 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.55 | 45.0 | 3.93e-01 | 94.0% | 99.0% |
| 4667951 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.55 | 45.0 | 4.13e-01 | 94.0% | 97.8% |
| 3486002 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.52 | 42.0 | 3.86e-01 | 95.5% | 94.7% |
| 3709816 | 306.5.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP | 0.52 | 40.0 | 3.44e-01 | 86.6% | 86.1% |
| 3716774 | 306.5.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › PF28980 | 0.52 | 40.0 | 3.42e-01 | 86.6% | 86.1% |
| 3928420 | 3680.1.1.0 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain | 0.51 | 36.0 | 2.89e-01 | 76.1% | 71.3% |
| 3727915 | 251.1.1.1 ↗ | a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS | 0.51 | 36.0 | 3.16e-01 | 76.1% | 86.7% |