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OQ508958.1__WGH49962.1__X__00053

Bact-Vir

OQ508958.1__WGH49962.1__X__00053

Identity

Accession:
OQ508958 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-69
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 65.0 6.44e-01 96.7% 81.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.79 56.0 5.98e-01 88.3% 86.5%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 71.0 5.29e-01 100.0% 48.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 61.0 5.68e-01 96.7% 68.5%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 70.0 5.45e-01 100.0% 52.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.41e-01 85.0% 96.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 53.0 5.84e-01 83.3% 93.5%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 62.0 6.41e-01 95.0% 93.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 57.0 5.51e-01 96.7% 71.0%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 53.0 5.81e-01 88.3% 91.7%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 56.0 5.99e-01 95.0% 96.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 4.78e-01 86.7% 52.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 60.0 6.16e-01 96.7% 92.9%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.33e-01 81.7% 72.3%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.93e-01 91.7% 100.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.72e-01 88.3% 92.2%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.71e-01 98.3% 76.2%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 6.00e-01 98.3% 87.3%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 57.0 5.39e-01 98.3% 73.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 52.0 5.45e-01 85.0% 85.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.68e-01 100.0% 81.8%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 62.0 6.13e-01 100.0% 91.9%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.72e-01 100.0% 91.5%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.25e-01 88.3% 75.4%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 55.0 5.32e-01 86.7% 92.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 6.04e-01 100.0% 96.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 51.0 5.39e-01 90.0% 90.6%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.56e-01 100.0% 88.3%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 5.41e-01 83.3% 95.9%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 58.0 3.45e-01 98.3% 36.0%
2lp6A00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.68 56.0 4.88e-01 100.0% 60.4%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.67 59.0 5.01e-01 96.7% 69.1%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.67 52.0 3.67e-01 86.7% 82.6%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.67 57.0 3.90e-01 96.7% 31.0%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 56.0 4.43e-01 100.0% 44.3%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.66 47.0 4.71e-01 76.7% 73.8%
1bnkA00 3.10.300.10 Alpha Beta › Roll › 3-methyladenine DNA Glycosylase; Chain A › Methylpurine-DNA glycosylase (MPG) 0.66 56.0 4.00e-01 100.0% 70.5%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 55.0 5.56e-01 100.0% 95.0%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.66 57.0 4.89e-01 96.7% 65.3%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 5.27e-01 90.0% 98.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.65 56.0 4.60e-01 95.0% 56.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.03e-01 100.0% 70.9%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.65 56.0 5.43e-01 98.3% 91.0%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 4.96e-01 100.0% 74.7%
3k67A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 49.0 3.64e-01 83.3% 80.1%
3ulbA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 44.0 4.06e-01 75.0% 65.1%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.14e-01 96.7% 90.3%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.63 53.0 4.55e-01 96.7% 97.0%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 5.07e-01 98.3% 94.1%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 45.0 3.52e-01 80.0% 72.9%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.58 52.0 4.63e-01 100.0% 73.8%
1ywuA00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.58 45.0 3.54e-01 85.0% 60.0%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.58 47.0 4.05e-01 90.0% 98.9%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.71e-01 100.0% 97.0%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 46.0 3.90e-01 93.3% 77.1%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 46.0 4.55e-01 100.0% 87.9%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.56 45.0 3.55e-01 90.0% 84.0%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 2.99e-01 91.7% 83.9%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.54 39.0 3.10e-01 78.3% 85.2%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 44.0 3.39e-01 95.0% 94.6%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 42.0 3.05e-01 86.7% 31.0%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.52 37.0 2.91e-01 80.0% 61.0%
2qkdA03 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.51 39.0 4.14e-01 88.3% 100.0%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 41.0 2.68e-01 98.3% 59.4%
3hrpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 42.0 3.70e-01 98.3% 91.6%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.85 61.0 6.13e-01 86.7% 75.0%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.83 60.0 6.47e-01 86.7% 92.0%
3484822 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.83 70.0 6.32e-01 96.7% 68.8%
3238405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 65.0 6.80e-01 93.3% 92.7%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 68.0 6.80e-01 98.3% 90.0%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 57.0 5.60e-01 86.7% 70.8%
3407089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 61.0 5.54e-01 96.7% 62.5%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.79 56.0 5.47e-01 85.0% 69.2%
3586487 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 62.0 5.49e-01 96.7% 60.0%
4536562 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 62.0 5.79e-01 96.7% 69.3%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 63.0 6.00e-01 100.0% 75.7%
3169607 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 62.0 5.72e-01 98.3% 68.0%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 62.0 4.50e-01 96.7% 32.9%
3996278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 63.0 4.98e-01 100.0% 44.2%
3498280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 56.0 4.34e-01 86.7% 35.4%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 69.0 4.53e-01 96.7% 30.7%
3451171 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 64.0 6.29e-01 95.0% 84.6%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 60.0 6.21e-01 95.0% 90.9%
3847592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 64.0 3.73e-01 90.0% 11.7%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.76 61.0 6.31e-01 91.7% 92.7%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 61.0 6.15e-01 100.0% 86.7%
4000280 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 59.0 6.14e-01 96.7% 90.9%
3420348 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.76 60.0 6.26e-01 96.7% 92.7%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.28e-01 95.0% 92.7%
3642001 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 63.0 5.97e-01 90.0% 90.0%
3508415 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 57.0 4.44e-01 95.0% 37.7%
3928711 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.61e-01 96.7% 65.9%
3620094 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 56.0 5.80e-01 91.7% 87.3%
3486328 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 61.0 6.18e-01 100.0% 90.0%
4932609 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 6.18e-01 96.7% 84.6%
3190835 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.75 60.0 5.36e-01 96.7% 62.4%
3907619 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 57.0 5.11e-01 96.7% 58.8%
3504417 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 59.0 5.17e-01 96.7% 57.8%
171891 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.74 57.0 5.95e-01 93.3% 90.9%
3518844 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 58.0 5.17e-01 96.7% 60.0%
4101502 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.74 59.0 6.24e-01 95.0% 96.3%
3408327 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 59.0 5.14e-01 96.7% 57.8%
1408049 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.74 60.0 4.54e-01 95.0% 38.2%
3879653 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.74 67.0 6.34e-01 100.0% 85.7%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 59.0 5.22e-01 96.7% 61.2%
4069560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 6.00e-01 96.7% 88.0%
3852545 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.96e-01 95.0% 86.7%
3922426 4.1.1.363 beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.74 63.0 4.95e-01 95.0% 46.7%
3941004 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.95e-01 100.0% 83.7%
3276044 4.1.1.315 beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.73 66.0 3.97e-01 98.3% 25.3%
3562168 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 56.0 4.91e-01 96.7% 55.6%
3581896 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.73 58.0 5.70e-01 96.7% 80.0%
3570399 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.07e-01 95.0% 95.4%
3637664 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.72 65.0 5.13e-01 100.0% 60.8%
3231154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 59.0 5.38e-01 93.3% 67.5%
2126408 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.72 65.0 5.86e-01 100.0% 81.5%
4268386 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.70e-01 96.7% 78.6%
2127246 4.8.1.4 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT 0.72 65.0 6.22e-01 100.0% 94.2%
3660922 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.72 57.0 5.62e-01 96.7% 80.0%
5042892 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.72 61.0 6.18e-01 96.7% 93.3%
3651964 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.72 59.0 4.69e-01 98.3% 45.0%
3251414 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.25e-01 100.0% 68.2%
4112177 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.71 58.0 5.70e-01 96.7% 83.1%
3354387 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.71 62.0 5.49e-01 96.7% 88.2%
3931905 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.76e-01 95.0% 47.8%
3366578 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.70 58.0 4.60e-01 98.3% 45.0%
3214653 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.15e-01 95.0% 60.0%
3440094 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.70 60.0 6.01e-01 96.7% 93.3%
3596265 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.12e-01 96.7% 74.0%
4058174 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 58.0 5.67e-01 98.3% 84.6%
4078120 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.69 57.0 5.93e-01 90.0% 98.2%
2831853 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.69 61.0 4.40e-01 96.7% 42.1%
3328647 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.68 59.0 5.24e-01 96.7% 70.6%
4073433 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 58.0 5.33e-01 96.7% 85.0%
4656461 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 54.0 5.43e-01 98.3% 88.3%
4228570 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.35e-01 100.0% 87.5%
3486329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 60.0 5.83e-01 98.3% 93.8%
4929472 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.34e-01 100.0% 87.5%
3700770 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.30e-01 86.7% 90.0%
3233461 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.59e-01 91.7% 96.7%
4559371 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 5.49e-01 96.7% 90.5%
4555816 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.16e-01 100.0% 76.5%
3574742 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.66 57.0 5.06e-01 100.0% 70.0%
3624163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.04e-01 100.0% 70.0%
4220126 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 5.06e-01 98.3% 75.3%
5002601 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.65 52.0 5.32e-01 100.0% 93.2%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 4.46e-01 100.0% 70.0%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 5.18e-01 100.0% 76.2%
3598125 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.09e-01 98.3% 78.7%
3173156 4.1.1.344 beta barrels › SH3 › SH3 › SH3 › PF31193 0.64 54.0 4.97e-01 98.3% 75.0%
3625817 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.64 55.0 5.05e-01 98.3% 75.0%
5022491 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.64 55.0 4.96e-01 100.0% 71.8%
3227009 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.63 54.0 5.11e-01 100.0% 81.3%
4613812 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.84e-01 98.3% 78.8%
4340758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 5.13e-01 100.0% 98.6%
2407461 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.62 52.0 4.06e-01 93.3% 76.3%
4110324 4.1.1.252 beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.62 50.0 4.68e-01 95.0% 87.5%
4528719 4.1.1.438 beta barrels › SH3 › SH3 › SH3 › PF27440 0.61 47.0 4.67e-01 85.0% 90.8%
3936053 4.1.1.71 beta barrels › SH3 › SH3 › SH3 › Gemin7 0.61 51.0 4.94e-01 100.0% 90.0%
3603956 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.59 51.0 3.49e-01 100.0% 69.8%
4481026 4.1.1.407 beta barrels › SH3 › SH3 › SH3 › PF29661 0.58 44.0 4.47e-01 93.3% 86.7%
169039 265.1.1.1 a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.56 45.0 3.55e-01 90.0% 84.0%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.18e-01 98.3% 84.3%
D2 medium residues 73-164
PDB
D3 medium residues 165-219
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zs7A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.68 50.0 4.18e-01 81.8% 69.2%
1sqwA01 3.10.450.220 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 50.0 4.23e-01 85.5% 97.8%
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.63 46.0 4.24e-01 80.0% 94.6%
5xrwC00 2.30.330.10 Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like 0.63 45.0 4.08e-01 76.4% 91.0%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 51.0 3.31e-01 100.0% 37.3%
1iq8A03 3.10.450.90 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain 0.60 47.0 4.38e-01 90.9% 95.9%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.59 41.0 3.93e-01 98.2% 63.5%
2od0A00 3.30.1460.30 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone 0.59 47.0 3.91e-01 90.9% 86.4%
1fneA01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.58 45.0 4.08e-01 87.3% 62.0%
1k8iB01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.58 46.0 4.06e-01 92.7% 68.1%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.58 50.0 4.34e-01 100.0% 92.2%
2ltlA00 3.30.1370.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Scaffold protein Nfu/NifU, N-terminal domain 0.58 43.0 3.51e-01 83.6% 48.7%
1k8iA01 3.10.320.10 Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 0.58 46.0 4.20e-01 90.9% 67.5%
3dbxA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.58 48.0 3.44e-01 98.2% 77.2%
5e1qB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.58 47.0 3.13e-01 100.0% 95.6%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.58 40.0 3.44e-01 74.5% 57.9%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.57 47.0 3.07e-01 98.2% 98.9%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 38.0 2.78e-01 76.4% 27.8%
2r6iA01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.54 43.0 3.61e-01 87.3% 51.0%
1t7vA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.54 44.0 3.25e-01 100.0% 46.1%
1qfxA02 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.54 41.0 2.78e-01 89.1% 72.5%
2q07A02 3.10.450.90 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain 0.54 41.0 3.95e-01 85.5% 87.7%
3eagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 42.0 2.78e-01 85.5% 22.9%
7z0sF01 3.30.70.3270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 37.0 2.69e-01 72.7% 53.4%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 36.0 2.49e-01 74.5% 89.0%
4g59C02 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.53 42.0 3.23e-01 96.4% 77.2%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.52 34.0 3.57e-01 94.5% 74.5%
5yh4A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 41.0 3.02e-01 96.4% 88.3%
4epkB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.52 44.0 2.78e-01 100.0% 31.8%
2r31A01 3.30.2180.10 Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like 0.51 40.0 3.78e-01 87.3% 71.2%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 40.0 3.33e-01 100.0% 94.3%
7vbnL01 3.30.160.190 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain 0.50 41.0 3.48e-01 90.9% 74.7%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3297758 5.3.1.2 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.76 53.0 3.81e-01 74.5% 71.9%
4966036 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.72 55.0 5.13e-01 83.6% 97.1%
3381458 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.71 50.0 3.76e-01 76.4% 77.1%
3604572 243.6.1.1 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.71 52.0 4.83e-01 80.0% 97.1%
3394354 243.6.1.4 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.68 51.0 4.25e-01 83.6% 78.0%
4031639 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.66 54.0 4.62e-01 90.9% 84.4%
5072222 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.66 49.0 4.53e-01 83.6% 92.0%
3261599 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.64 41.0 2.80e-01 87.3% 18.1%
4975601 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.63 47.0 4.52e-01 81.8% 73.8%
4990786 1.1.9.1 beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.63 48.0 3.58e-01 85.5% 44.7%
3284412 241.11.1.6 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N 0.62 45.0 3.68e-01 78.2% 81.9%
4022770 331.4.1.3 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.62 51.0 4.09e-01 100.0% 80.0%
5003260 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.61 47.0 4.08e-01 87.3% 78.9%
2875633 304.55.1.8 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › TrwC 0.61 46.0 2.99e-01 85.5% 54.6%
3460631 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.61 49.0 3.59e-01 89.1% 49.7%
4939844 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.61 48.0 4.55e-01 90.9% 98.6%
5041419 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.61 47.0 4.22e-01 87.3% 87.5%
5059446 241.7.1.1 a+b two layers › Type III secretory system chaperone-like › YgaC/TfoX-N like › YgaC/TfoX-N like › TfoX_N 0.60 48.0 4.03e-01 89.1% 88.0%
4411265 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.60 47.0 3.39e-01 89.1% 40.0%
4957002 243.6.1.0 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain 0.60 44.0 4.06e-01 85.5% 93.8%
6437 243.6.1.2 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C1,TGT_C2 0.60 47.0 3.59e-01 90.9% 49.0%
3778614 233.1.1.5 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2 0.60 49.0 3.50e-01 100.0% 40.0%
4936682 243.6.1.8 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › AF_0587-like_pre-PUA 0.58 44.0 3.92e-01 85.5% 82.4%
4927545 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.58 43.0 4.11e-01 85.5% 98.6%
3771322 233.1.1.3 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha 0.57 45.0 3.82e-01 90.9% 52.0%
3210826 2485.1.1.67 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.57 42.0 2.86e-01 81.8% 91.4%
3211193 5001.1.1.106 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str 0.57 38.0 2.33e-01 100.0% 11.5%
3768259 233.1.1.5 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I_2 0.57 45.0 3.35e-01 100.0% 48.9%
5005203 243.6.1.9 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.57 44.0 4.00e-01 90.9% 86.3%
3257852 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.55 44.0 4.44e-01 94.5% 92.7%
3912902 233.1.1.3 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_II_alpha 0.55 42.0 3.76e-01 90.9% 57.6%
4040812 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.55 46.0 3.99e-01 96.4% 91.0%
3394788 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.55 42.0 2.92e-01 94.5% 80.0%
4025709 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.55 41.0 3.94e-01 83.6% 72.3%
4156980 243.1.1.76 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF25976 0.55 41.0 3.31e-01 85.5% 94.2%
3351647 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.55 46.0 3.63e-01 96.4% 69.2%
6441 243.6.1.8 a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › AF_0587-like_pre-PUA 0.54 41.0 3.93e-01 85.5% 86.4%
4024943 4351.1.1.0 alpha arrays › ATP12-like › ATP12-like › ATP12-like 0.53 43.0 2.89e-01 89.1% 22.7%
4877157 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.53 43.0 2.79e-01 98.2% 23.1%
3370535 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.53 45.0 3.54e-01 100.0% 73.6%
3784956 4351.1.1.1 alpha arrays › ATP12-like › ATP12-like › ATP12-like › ATP12 0.53 42.0 2.69e-01 89.1% 16.8%
3217313 5001.1.1.106 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str 0.53 43.0 2.72e-01 96.4% 51.2%
3495925 4351.1.1.0 alpha arrays › ATP12-like › ATP12-like › ATP12-like 0.53 42.0 2.78e-01 87.3% 22.1%
3972955 4263.2.1.2 a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain › DUF6482 0.51 40.0 3.78e-01 90.9% 77.1%
4865040 3070.2.1.1 a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain › Plug 0.50 41.0 3.23e-01 98.2% 60.2%