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OQ515481.1__WGA02322.1__X__00072

Bact-Vir

OQ515481.1__WGA02322.1__X__00072

Identity

Accession:
OQ515481 ↗
Kingdom:
phage

Quality

67.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-77
PDB
D2 high residues 80-143
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.71 50.0 4.40e-01 100.0% 50.0%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.67 51.0 4.78e-01 100.0% 66.3%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.43e-01 100.0% 58.3%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.67 51.0 4.81e-01 100.0% 67.9%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 44.0 3.33e-01 100.0% 30.1%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 3.68e-01 100.0% 42.6%
7xrxB01 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.65 55.0 3.37e-01 93.8% 98.7%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.44e-01 100.0% 65.3%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.35e-01 100.0% 69.7%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 42.0 4.01e-01 100.0% 58.7%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 40.0 4.13e-01 100.0% 67.7%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.39e-01 100.0% 73.4%
2e9hA01 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.62 41.0 3.41e-01 100.0% 38.9%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.16e-01 100.0% 61.0%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.36e-01 100.0% 72.5%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 3.87e-01 100.0% 62.3%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.60 45.0 3.92e-01 100.0% 52.5%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.89e-01 100.0% 57.6%
1t02A02 3.90.770.10 Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 0.58 41.0 2.68e-01 75.0% 86.9%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.92e-01 100.0% 60.7%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 3.81e-01 100.0% 62.7%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.57 38.0 3.41e-01 100.0% 47.3%
1lddA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.01e-01 100.0% 70.3%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.99e-01 87.5% 93.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 37.0 3.36e-01 96.9% 47.8%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.56 48.0 3.95e-01 100.0% 53.0%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.89e-01 100.0% 68.0%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.54 38.0 3.72e-01 100.0% 68.6%
3l4gC03 1.10.10.2330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 33.0 3.53e-01 100.0% 73.6%
4qmfD02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.53 38.0 3.43e-01 76.6% 73.9%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.51e-01 96.9% 66.7%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 41.0 2.78e-01 87.5% 36.9%
2kx2A00 3.30.780.30 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › 0.53 39.0 3.50e-01 81.2% 96.9%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.53 42.0 3.23e-01 93.8% 93.0%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.53 41.0 3.66e-01 93.8% 90.7%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 35.0 3.48e-01 100.0% 63.4%
6swc801 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.53 44.0 3.76e-01 100.0% 71.6%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.52 42.0 2.73e-01 90.6% 80.1%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.69e-01 82.8% 93.6%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.52 43.0 4.11e-01 98.4% 96.2%
1i27A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.54e-01 100.0% 65.8%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 34.0 3.23e-01 100.0% 55.0%
4p72A04 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.51 43.0 4.09e-01 95.3% 88.2%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.51 37.0 2.39e-01 100.0% 15.9%
1uxyA01 3.90.78.10 Alpha Beta › Alpha-Beta Complex › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1 › UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 0.51 41.0 3.44e-01 95.3% 91.1%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.51 36.0 3.22e-01 79.7% 83.3%
4m0nA02 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.50 44.0 4.14e-01 98.4% 80.5%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.50 42.0 3.48e-01 96.9% 98.4%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282605 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.69 46.0 4.24e-01 100.0% 55.0%
3831826 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.69 50.0 4.68e-01 78.1% 91.3%
3512361 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.69 52.0 4.78e-01 100.0% 62.4%
3242475 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.69 53.0 4.70e-01 100.0% 58.9%
4432407 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.68 52.0 4.64e-01 100.0% 58.9%
3554284 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.67 51.0 4.37e-01 100.0% 50.5%
3634624 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.67 44.0 2.78e-01 100.0% 13.2%
3482679 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 49.0 4.50e-01 79.7% 88.2%
3201844 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.66 43.0 3.68e-01 100.0% 41.0%
5082110 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 4.95e-01 100.0% 83.3%
5072945 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 4.50e-01 100.0% 73.3%
3736908 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 42.0 3.69e-01 100.0% 43.0%
4932760 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.64 48.0 4.57e-01 79.7% 97.3%
3685818 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 43.0 4.19e-01 100.0% 62.9%
3694813 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.64 42.0 3.72e-01 100.0% 45.3%
5028329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 4.56e-01 100.0% 69.3%
3448646 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 4.53e-01 100.0% 73.8%
3279756 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.63 45.0 3.54e-01 100.0% 35.0%
5041631 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 40.0 4.20e-01 100.0% 74.5%
5052340 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.40e-01 100.0% 70.0%
3471467 101.1.2.169 alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 0.63 39.0 3.31e-01 100.0% 38.1%
4407103 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.62 43.0 4.49e-01 75.0% 90.0%
3487912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 3.77e-01 100.0% 44.5%
3188677 306.3.1.2 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 0.62 37.0 3.44e-01 100.0% 46.3%
3165321 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.62 44.0 3.99e-01 100.0% 54.4%
4102573 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.62 39.0 3.66e-01 100.0% 51.2%
3315108 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.61 44.0 3.65e-01 100.0% 43.6%
4946714 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.61 45.0 4.07e-01 100.0% 56.7%
4026719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 46.0 3.70e-01 100.0% 41.6%
3258285 101.1.2.288 alpha arrays › HTH › HTH › winged helix domain › Stk19 0.61 40.0 3.97e-01 100.0% 62.9%
3518904 101.1.2.556 alpha arrays › HTH › HTH › winged helix domain › PF26288 0.60 44.0 4.07e-01 100.0% 60.0%
3481546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 41.0 4.09e-01 100.0% 69.2%
3413705 101.1.2.137 alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.60 44.0 4.01e-01 100.0% 57.8%
3441807 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.59 46.0 4.25e-01 100.0% 64.7%
3339574 101.1.2.385 alpha arrays › HTH › HTH › winged helix domain › HRQ1_WHD 0.59 37.0 3.34e-01 100.0% 45.6%
3487239 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 4.14e-01 100.0% 73.8%
3979431 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.58 43.0 3.34e-01 100.0% 34.7%
3301908 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.58 39.0 3.46e-01 100.0% 47.4%
5026869 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.57 40.0 3.70e-01 75.0% 75.3%
5041057 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.56e-01 100.0% 50.5%
3675645 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.58e-01 100.0% 46.1%
4024063 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.56 41.0 3.67e-01 79.7% 73.7%
3666925 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.56 42.0 3.53e-01 100.0% 44.0%
5073852 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.56 45.0 3.74e-01 93.8% 72.0%
2417935 101.1.2.192 alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C 0.55 43.0 4.24e-01 100.0% 78.6%
5077205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.81e-01 100.0% 57.9%
3595844 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.72e-01 79.7% 82.4%
3370400 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 33.0 3.20e-01 100.0% 54.3%
3390936 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.54 37.0 3.23e-01 100.0% 46.0%
5053763 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 3.47e-01 100.0% 54.4%
3612108 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.53 38.0 3.78e-01 79.7% 100.0%
5067176 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.53 43.0 3.17e-01 100.0% 57.1%
3492262 327.19.1.2 a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › Mlh1_C 0.52 44.0 3.91e-01 100.0% 64.0%
3530824 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.52 35.0 3.33e-01 100.0% 57.5%
3630104 192.24.1.6 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.52 43.0 2.72e-01 96.9% 75.3%
4168215 101.1.9.5 alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 0.51 42.0 3.96e-01 95.3% 83.7%
3929490 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 34.0 3.27e-01 100.0% 57.5%
4679974 101.1.2.20 alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.50 35.0 3.42e-01 100.0% 65.3%