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OQ540978.1__WIW36177.1__X__00004
Bact-VirOQ540978.1__WIW36177.1__X__00004
Identity
- Accession:
- OQ540978 ↗
- Kingdom:
- phage
Quality
73.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mtkvariviridae›
Kuravirus›
Escherichia_phage_pEC-N1203-2Af.1
TaxID: 3032258
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-60
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 57.0 | 5.66e-01 | 84.7% | 98.4% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.74 | 59.0 | 5.49e-01 | 86.4% | 76.7% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 57.0 | 5.68e-01 | 84.7% | 100.0% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 56.0 | 5.34e-01 | 83.1% | 82.4% |
| 4kbmB01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 51.0 | 5.30e-01 | 76.3% | 100.0% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 53.0 | 5.43e-01 | 81.4% | 98.3% |
| 3tzuA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.70 | 54.0 | 4.25e-01 | 84.7% | 97.6% |
| 6bogA02 | 2.30.30.930 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 51.0 | 5.10e-01 | 79.7% | 90.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.68 | 52.0 | 4.79e-01 | 83.1% | 85.3% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 52.0 | 4.99e-01 | 86.4% | 92.8% |
| 1gvzA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 47.0 | 3.74e-01 | 76.3% | 87.6% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 44.0 | 3.48e-01 | 76.3% | 73.9% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 46.0 | 3.80e-01 | 83.1% | 83.6% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 45.0 | 3.99e-01 | 84.7% | 73.3% |
| 1yw4B00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 40.0 | 2.58e-01 | 72.9% | 28.5% |
| 4ifdI02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 39.0 | 2.98e-01 | 72.9% | 41.0% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.56 | 40.0 | 2.87e-01 | 78.0% | 43.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4135259 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.79 | 63.0 | 6.09e-01 | 86.4% | 98.5% |
| 5036616 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.78 | 61.0 | 5.75e-01 | 83.1% | 85.7% |
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 59.0 | 6.08e-01 | 81.4% | 98.2% |
| 4967397 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.77 | 59.0 | 5.73e-01 | 81.4% | 92.3% |
| 4980648 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 60.0 | 5.63e-01 | 83.1% | 87.1% |
| 4446791 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.75 | 60.0 | 5.80e-01 | 86.4% | 96.9% |
| 5005813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 53.0 | 5.71e-01 | 81.4% | 90.0% |
| 5066141 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.74 | 56.0 | 5.47e-01 | 81.4% | 89.2% |
| 3821751 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.73 | 58.0 | 5.23e-01 | 86.4% | 80.0% |
| 4331473 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.73 | 57.0 | 5.19e-01 | 86.4% | 68.8% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.72 | 55.0 | 4.90e-01 | 83.1% | 62.4% |
| 3839849 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.72 | 58.0 | 5.63e-01 | 88.1% | 80.0% |
| 4662947 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.72 | 56.0 | 5.51e-01 | 86.4% | 78.5% |
| 3278801 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.71 | 56.0 | 5.50e-01 | 86.4% | 78.5% |
| 4611708 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.71 | 55.0 | 5.48e-01 | 83.1% | 81.7% |
| 4032729 | 4.1.1.168 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2187 | 0.71 | 56.0 | 5.72e-01 | 86.4% | 100.0% |
| 3989139 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.70 | 58.0 | 5.67e-01 | 91.5% | 83.1% |
| 4165723 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.70 | 55.0 | 5.38e-01 | 86.4% | 80.0% |
| 3282690 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.69 | 53.0 | 4.22e-01 | 84.7% | 41.7% |
| 3957249 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 48.0 | 5.01e-01 | 76.3% | 94.5% |
| 3946297 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.66 | 53.0 | 5.03e-01 | 88.1% | 81.4% |
| 4120506 | 243.11.1.4 ↗ | a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632 | 0.62 | 43.0 | 3.97e-01 | 74.6% | 71.2% |
| 2557227 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.62 | 48.0 | 4.54e-01 | 89.8% | 90.9% |
| 3401697 | 4357.1.1.4 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_3 | 0.61 | 41.0 | 3.74e-01 | 71.2% | 74.1% |
| 4163711 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 47.0 | 4.18e-01 | 83.1% | 76.5% |
| 4854958 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.60 | 46.0 | 3.95e-01 | 84.7% | 68.8% |
| 4047241 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 45.0 | 3.89e-01 | 84.7% | 69.5% |
| 4111597 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 45.0 | 4.39e-01 | 84.7% | 100.0% |
| 1832368 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.57 | 42.0 | 3.04e-01 | 83.1% | 29.0% |
| 3623874 | 2.1.1.51 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EXOSC1 | 0.56 | 39.0 | 3.03e-01 | 74.6% | 43.7% |
| 3232865 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 2.96e-01 | 74.6% | 43.7% |
| 5072324 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.51 | 36.0 | 3.24e-01 | 81.4% | 98.9% |
| 3910857 | 4138.1.1.1 ↗ | few secondary structure elements › Granulin repeat › Granulin repeat › Granulin repeat › Granulin | 0.50 | 36.0 | 3.41e-01 | 78.0% | 93.3% |
| 3576914 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.50 | 38.0 | 3.39e-01 | 86.4% | 57.6% |