←Back to structures
OQ547903.1__WFD61275.1__X__00068
Bact-VirOQ547903.1__WFD61275.1__X__00068
Identity
- Accession:
- OQ547903 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Taxonomy
TaxID: 3032371
Cluster
View cluster (23 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-64
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04448.18 best | DUF551 | 31.8 | 3.00e-07 | 100.0% | 86.8% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 57.0 | 5.06e-01 | 98.2% | 79.1% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 55.0 | 5.40e-01 | 91.1% | 95.2% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 55.0 | 5.44e-01 | 92.9% | 90.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 5.39e-01 | 85.7% | 100.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 4.72e-01 | 100.0% | 66.7% |
| 3k2zA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.64 | 53.0 | 4.26e-01 | 100.0% | 45.4% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.64 | 55.0 | 4.57e-01 | 100.0% | 54.5% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.74e-01 | 85.7% | 76.9% |
| 1b12C01 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.63 | 53.0 | 4.24e-01 | 100.0% | 55.4% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 51.0 | 5.03e-01 | 92.9% | 94.9% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 52.0 | 4.54e-01 | 96.4% | 69.0% |
| 1v61A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 47.0 | 3.62e-01 | 85.7% | 59.8% |
| 4gzuB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 46.0 | 4.05e-01 | 85.7% | 79.1% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.61 | 52.0 | 4.11e-01 | 100.0% | 45.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 53.0 | 4.86e-01 | 100.0% | 75.3% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 3.61e-01 | 85.7% | 70.1% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.56 | 47.0 | 3.64e-01 | 100.0% | 90.1% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 44.0 | 3.02e-01 | 91.1% | 41.4% |
| 1ktbA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 48.0 | 4.14e-01 | 100.0% | 73.6% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 45.0 | 3.94e-01 | 96.4% | 71.7% |
| 1t6eX01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 40.0 | 2.91e-01 | 82.1% | 94.3% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 38.0 | 3.68e-01 | 76.8% | 95.5% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.54 | 39.0 | 3.00e-01 | 82.1% | 79.2% |
| 3pnnA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 43.0 | 2.86e-01 | 100.0% | 50.8% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 44.0 | 3.70e-01 | 100.0% | 88.5% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.52 | 42.0 | 3.66e-01 | 100.0% | 90.1% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.52 | 42.0 | 4.09e-01 | 91.1% | 98.4% |
| 1a1rA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 41.0 | 3.72e-01 | 92.9% | 61.2% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 45.0 | 3.78e-01 | 100.0% | 62.6% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4163661 | 4.1.1.446 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30222 | 0.76 | 63.0 | 6.00e-01 | 94.6% | 97.1% |
| 4008273 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 68.0 | 6.33e-01 | 100.0% | 88.6% |
| 3625817 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.72 | 62.0 | 5.58e-01 | 100.0% | 83.7% |
| 5032461 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 60.0 | 5.75e-01 | 94.6% | 98.5% |
| 5034351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 55.0 | 5.57e-01 | 85.7% | 100.0% |
| 145704 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.68 | 54.0 | 5.39e-01 | 89.3% | 84.5% |
| 3263932 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 52.0 | 3.93e-01 | 85.7% | 59.3% |
| 1482194 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.67 | 55.0 | 5.44e-01 | 92.9% | 90.0% |
| 3302818 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.66 | 54.0 | 5.49e-01 | 92.9% | 92.7% |
| 3547084 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 56.0 | 4.79e-01 | 100.0% | 58.9% |
| 3036710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.47e-01 | 98.2% | 93.7% |
| 4963111 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.66 | 48.0 | 5.18e-01 | 85.7% | 100.0% |
| 5074749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 5.09e-01 | 98.2% | 82.9% |
| 4034190 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.63 | 53.0 | 4.17e-01 | 98.2% | 80.0% |
| 4091771 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 5.06e-01 | 92.9% | 98.3% |
| 3519597 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 53.0 | 4.59e-01 | 100.0% | 63.2% |
| 3414912 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 53.0 | 4.43e-01 | 100.0% | 59.0% |
| 5042797 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 51.0 | 5.09e-01 | 96.4% | 98.3% |
| 4975150 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.94e-01 | 94.6% | 91.7% |
| 3394215 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 53.0 | 4.42e-01 | 100.0% | 62.0% |
| 3810562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 48.0 | 4.53e-01 | 98.2% | 93.3% |
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.59 | 49.0 | 4.01e-01 | 100.0% | 51.7% |
| 3933539 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 50.0 | 4.83e-01 | 100.0% | 95.4% |
| 3164374 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.59 | 44.0 | 4.62e-01 | 85.7% | 98.0% |
| 3225248 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 40.0 | 3.24e-01 | 73.2% | 68.7% |
| 4660673 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.58 | 50.0 | 4.46e-01 | 100.0% | 84.7% |
| 4972138 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.58 | 48.0 | 4.07e-01 | 100.0% | 91.4% |
| 1832368 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.56 | 41.0 | 2.91e-01 | 80.4% | 24.9% |
| 3210799 | 375.1.1.52 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_6 | 0.56 | 38.0 | 3.76e-01 | 85.7% | 65.6% |
| 3504834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 43.0 | 4.32e-01 | 92.9% | 96.6% |
| 3826272 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 42.0 | 2.73e-01 | 100.0% | 24.5% |
| 4082437 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.50 | 40.0 | 4.05e-01 | 96.4% | 94.5% |