←Back to structures

OQ578995.1__WGL32332.1__X__00004

Bact-Vir

OQ578995.1__WGL32332.1__X__00004

Identity

Accession:
OQ578995 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Taxonomy

Staphylococcus_phage_phiST9-C

TaxID: 3038984

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-51
PDB
Domain cluster: representative
D2 high residues 65-103
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.87 77.0 5.40e-01 100.0% 34.5%
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.85 75.0 5.43e-01 100.0% 38.1%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 54.0 4.32e-01 100.0% 90.8%
2rf4E02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 54.0 4.28e-01 100.0% 98.8%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 49.0 4.46e-01 100.0% 70.2%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.58 48.0 3.08e-01 100.0% 20.8%
5lm7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 3.93e-01 100.0% 82.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 3.79e-01 100.0% 51.4%
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.55 45.0 3.83e-01 100.0% 94.5%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 3.77e-01 100.0% 70.0%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 43.0 3.92e-01 100.0% 67.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 3.61e-01 100.0% 64.2%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 42.0 3.44e-01 100.0% 90.2%
1zj8A04 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.51 35.0 2.62e-01 87.2% 93.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3219406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.71e-01 100.0% 72.0%
5019855 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 47.0 3.93e-01 100.0% 48.6%
3929784 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.42e-01 100.0% 70.0%
3595489 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 40.0 3.52e-01 94.9% 51.7%
3257563 101.1.1.76 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.55 41.0 3.16e-01 84.6% 63.2%
3596008 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.29e-01 94.9% 97.5%
4077036 304.102.1.6 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.52 41.0 2.70e-01 100.0% 19.6%
3743730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 41.0 3.54e-01 100.0% 53.3%
3398355 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.52 39.0 2.48e-01 94.9% 21.2%
5058386 304.102.1.4 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.51 41.0 2.79e-01 100.0% 23.2%
4929294 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.50 41.0 2.75e-01 100.0% 22.8%