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OQ587940.1__WGL30547.1__SCRES2_gp8__00008
Bact-VirOQ587940.1__WGL30547.1__SCRES2_gp8__00008
Identity
- Accession:
- OQ587940 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-58
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.74 | 62.0 | 5.22e-01 | 94.2% | 70.1% |
| 3uoeA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.71 | 58.0 | 4.99e-01 | 94.2% | 64.4% |
| 1xrhD01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.70 | 57.0 | 4.70e-01 | 96.2% | 55.3% |
| 2i5uA00 | 1.10.10.630 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like | 0.69 | 60.0 | 5.31e-01 | 100.0% | 80.5% |
| 1wivA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 48.0 | 4.40e-01 | 100.0% | 56.2% |
| 3t6pA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 57.0 | 5.38e-01 | 100.0% | 78.8% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 56.0 | 4.89e-01 | 100.0% | 60.5% |
| 2o71A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.66 | 49.0 | 4.20e-01 | 88.5% | 48.4% |
| 3f2bA07 | 6.10.140.1510 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 48.0 | 4.09e-01 | 86.5% | 48.8% |
| 7jiuA03 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.64 | 44.0 | 3.31e-01 | 73.1% | 29.4% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 42.0 | 3.67e-01 | 88.5% | 72.3% |
| 1ignB02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 37.0 | 3.16e-01 | 75.0% | 41.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991379 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.77 | 61.0 | 3.97e-01 | 100.0% | 20.5% |
| 4103136 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.75 | 51.0 | 5.33e-01 | 88.5% | 79.2% |
| 1843727 | 103.18.1.0 ↗ | alpha arrays › RuvA-C | 0.73 | 55.0 | 5.50e-01 | 88.5% | 82.7% |
| 5044117 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.71 | 58.0 | 3.77e-01 | 100.0% | 20.0% |
| 5054660 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 59.0 | 5.51e-01 | 100.0% | 73.8% |
| 3204020 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.71 | 51.0 | 5.25e-01 | 96.2% | 83.3% |
| 3344233 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 53.0 | 3.60e-01 | 84.6% | 22.1% |
| 3573813 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.68 | 47.0 | 5.11e-01 | 98.1% | 97.5% |
| 4629851 | 103.5.1.2 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm | 0.68 | 53.0 | 4.84e-01 | 98.1% | 64.0% |
| 3781465 | 103.1.1.88 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF27606 | 0.67 | 46.0 | 4.46e-01 | 90.4% | 63.3% |
| 3473478 | 103.1.1.4 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TAP_C | 0.66 | 52.0 | 5.33e-01 | 100.0% | 94.0% |
| 3450135 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.66 | 51.0 | 4.74e-01 | 88.5% | 72.9% |
| 3707633 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.66 | 49.0 | 4.98e-01 | 100.0% | 86.0% |
| 4938496 | 103.17.1.0 ↗ | alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain | 0.65 | 49.0 | 4.87e-01 | 98.1% | 81.8% |
| 3760771 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 54.0 | 4.71e-01 | 100.0% | 64.7% |
| 3200635 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.64 | 40.0 | 4.11e-01 | 73.1% | 66.0% |
| 4581259 | 1112.1.1.0 ↗ | alpha arrays › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain › MshE c-di-GMP-binding domain | 0.64 | 47.0 | 4.57e-01 | 86.5% | 71.7% |
| 5014989 | 632.1.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › PSMA-like_C | 0.62 | 45.0 | 2.90e-01 | 78.8% | 41.1% |
| 3332113 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.61 | 40.0 | 3.72e-01 | 71.2% | 50.0% |
| 4933655 | 103.17.1.0 ↗ | alpha arrays › RuvA-C › HMG-CoA reductase flap domain › HMG-CoA reductase flap domain | 0.60 | 45.0 | 4.47e-01 | 98.1% | 81.8% |
| 3213894 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.59 | 51.0 | 4.47e-01 | 94.2% | 89.3% |
| 4508874 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.59 | 43.0 | 3.69e-01 | 84.6% | 81.1% |
| 4656568 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.58 | 49.0 | 3.04e-01 | 98.1% | 56.6% |
| 2581429 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.53 | 40.0 | 3.93e-01 | 86.5% | 83.1% |
| 5033312 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.53 | 44.0 | 2.76e-01 | 96.2% | 16.6% |
| 5069816 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.53 | 41.0 | 3.98e-01 | 90.4% | 96.7% |
| 4938672 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 38.0 | 3.60e-01 | 88.5% | 80.0% |
| 4121287 | 253.1.1.1 ↗ | a+b complex topology › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Argininosuccinate synthetase-C › Arginosuc_syn_C | 0.51 | 40.0 | 2.66e-01 | 84.6% | 23.5% |