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OQ587940.1__WGL30594.1__SCRES2_gp55__00055

Bact-Vir

OQ587940.1__WGL30594.1__SCRES2_gp55__00055

Identity

Accession:
OQ587940 ↗
Kingdom:
phage

Quality

77.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_S-CRES2

TaxID: 3038221

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-86
PDB
Domain cluster: rep: MN270266.1__QGJ85858.1__X__00053__D136-224
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.74 59.0 6.05e-01 95.1% 89.6%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.66 43.0 4.88e-01 82.9% 94.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 40.0 4.81e-01 84.1% 96.2%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.65 38.0 4.55e-01 81.7% 88.7%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 39.0 4.65e-01 82.9% 100.0%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.62 48.0 3.67e-01 93.9% 34.7%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.62 35.0 4.33e-01 74.4% 97.8%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 44.0 3.68e-01 76.8% 87.9%
2db9A01 3.90.70.200 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Plus-3 domain 0.61 52.0 4.48e-01 97.6% 85.7%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 39.0 3.35e-01 85.4% 41.9%
1vhvA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.59 40.0 3.41e-01 95.1% 42.4%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 40.0 3.55e-01 73.2% 81.7%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 42.0 4.28e-01 82.9% 79.7%
3stjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 37.0 3.74e-01 86.6% 63.5%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.42e-01 97.6% 82.7%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.57 41.0 4.43e-01 95.1% 93.9%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 40.0 4.44e-01 80.5% 100.0%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.56 48.0 4.17e-01 98.8% 91.7%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.45e-01 97.6% 97.2%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 40.0 3.43e-01 78.0% 71.8%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 43.0 4.04e-01 97.6% 68.3%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 38.0 4.33e-01 79.3% 100.0%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.55 38.0 3.05e-01 72.0% 77.2%
3pjyA00 2.60.120.1140 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 0.55 43.0 3.74e-01 86.6% 97.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 4.28e-01 85.4% 95.5%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 36.0 4.15e-01 75.6% 100.0%
2dsiA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.54 40.0 3.32e-01 95.1% 43.0%
3i4tA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.54 40.0 3.32e-01 95.1% 44.5%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.54 45.0 3.77e-01 98.8% 72.2%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.53 45.0 4.30e-01 91.5% 80.9%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 41.0 4.20e-01 82.9% 87.2%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 3.17e-01 93.9% 43.1%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.48e-01 89.0% 51.1%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 46.0 4.10e-01 98.8% 70.2%
3bpkA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 42.0 3.24e-01 86.6% 59.8%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.63e-01 92.7% 54.3%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.32e-01 89.0% 45.8%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.56e-01 87.8% 83.3%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 42.0 3.40e-01 89.0% 49.7%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 4.33e-01 97.6% 93.8%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 3.50e-01 89.0% 56.3%
5hn3A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.50 43.0 2.92e-01 97.6% 61.1%
4z85A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 3.03e-01 86.6% 52.3%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 44.0 5.22e-01 92.7% 90.9%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.70e-01 92.7% 90.0%
3972550 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.72 60.0 5.60e-01 95.1% 74.0%
4625654 4.1.1.445 ↗ beta barrels › SH3 › SH3 › SH3 › Spore_GerQ 0.70 56.0 5.88e-01 96.3% 96.0%
4589595 4.1.1.447 ↗ beta barrels › SH3 › SH3 › SH3 › PF28065 0.70 52.0 5.66e-01 97.6% 100.0%
4642857 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 57.0 5.81e-01 92.7% 96.2%
4152374 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.73e-01 93.9% 94.0%
4422325 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.47e-01 92.7% 93.3%
3408588 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.65 43.0 4.64e-01 80.5% 80.0%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 5.70e-01 93.9% 98.8%
4425420 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 5.57e-01 93.9% 91.8%
4387099 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 5.69e-01 93.9% 96.2%
5070610 4.1.2.2 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 0.65 58.0 5.62e-01 98.8% 97.8%
4942805 4.1.1.301 ↗ beta barrels › SH3 › SH3 › SH3 › MJ1316 0.64 56.0 5.55e-01 100.0% 92.9%
2469820 219.1.1.49 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C70 0.64 55.0 4.43e-01 95.1% 50.0%
3423334 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.63 48.0 4.22e-01 97.6% 53.1%
3270102 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.63 39.0 2.43e-01 86.6% 12.7%
3992765 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.61 51.0 4.76e-01 93.9% 87.6%
3254941 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.61 52.0 4.52e-01 96.3% 86.2%
3587906 4.1.1.46 ↗ beta barrels › SH3 › SH3 › SH3 › VEG 0.61 51.0 5.15e-01 96.3% 95.0%
3939175 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.60 52.0 4.30e-01 97.6% 76.0%
3661025 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.60 47.0 4.30e-01 93.9% 62.6%
3252725 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.60 45.0 4.17e-01 80.5% 91.4%
3588755 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.73e-01 81.7% 87.8%
3738161 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.59 50.0 4.41e-01 96.3% 89.6%
4013324 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.88e-01 91.5% 100.0%
3486189 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.59e-01 81.7% 100.0%
3576534 9.15.1.1 ↗ beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.58 50.0 3.92e-01 96.3% 77.8%
4372435 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.58 39.0 3.21e-01 95.1% 36.8%
3928262 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.56e-01 81.7% 100.0%
3213215 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.34e-01 96.3% 87.8%
5017559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 4.36e-01 74.4% 100.0%
3199589 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.52e-01 91.5% 87.8%
3787905 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.54 39.0 4.16e-01 78.0% 90.0%
3234947 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 38.0 4.13e-01 80.5% 93.8%
3570230 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.53 44.0 4.29e-01 91.5% 87.8%
3447254 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.53 46.0 3.44e-01 100.0% 59.1%
5028702 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.53 42.0 3.53e-01 92.7% 50.7%
3274993 10.12.1.52 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 0.53 47.0 2.99e-01 97.6% 32.2%
3605448 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.52 42.0 2.82e-01 93.9% 24.0%
4031205 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.52 42.0 3.14e-01 86.6% 56.1%
3281870 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.52 46.0 3.90e-01 97.6% 62.2%
161432 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.52 43.0 3.63e-01 92.7% 54.0%
3698363 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.51 46.0 3.54e-01 97.6% 55.0%
5049939 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.51 41.0 3.35e-01 92.7% 46.8%
3972526 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 38.0 4.09e-01 84.1% 95.7%
4930864 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.50 41.0 3.13e-01 86.6% 72.2%
5018015 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.50 43.0 3.53e-01 93.9% 52.4%
3511356 4056.1.1.1 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 0.50 38.0 3.55e-01 81.7% 97.1%
4975825 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.50 41.0 3.40e-01 89.0% 51.4%