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OQ587941.1__WGL30779.1__SCRES3_gp122__00122

Bact-Vir

OQ587941.1__WGL30779.1__SCRES3_gp122__00122

Identity

Accession:
OQ587941 ↗
Kingdom:
phage

Quality

89.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_S-CRES3

TaxID: 3038222

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-67
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 40.0 4.29e-01 81.8% 66.1%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 45.0 3.87e-01 92.4% 43.3%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.67 51.0 4.91e-01 81.8% 84.2%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 44.0 4.43e-01 87.9% 69.1%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.62 54.0 4.62e-01 98.5% 64.8%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 44.0 2.88e-01 93.9% 16.3%
2rsoA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 39.0 3.57e-01 90.9% 47.8%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 43.0 3.41e-01 75.8% 80.6%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.61 41.0 3.92e-01 90.9% 59.7%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.60 52.0 4.18e-01 100.0% 56.6%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 46.0 2.91e-01 89.4% 16.4%
3g8zA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 42.0 3.44e-01 75.8% 85.2%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 45.0 2.90e-01 86.4% 19.0%
3f40A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.56e-01 77.3% 83.8%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.58 44.0 4.17e-01 84.8% 90.4%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.57 43.0 3.74e-01 97.0% 52.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 42.0 3.92e-01 89.4% 63.0%
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 3.32e-01 75.8% 85.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.55e-01 90.9% 94.7%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 2.99e-01 92.4% 26.5%
1st8A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 47.0 3.05e-01 93.9% 26.4%
2y1sA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.55 46.0 4.01e-01 97.0% 63.0%
2cy5A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.61e-01 90.9% 49.6%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.17e-01 97.0% 75.0%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.55 43.0 4.01e-01 87.9% 84.5%
1f0cA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 47.0 3.95e-01 98.5% 98.3%
3iq2A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 40.0 3.36e-01 90.9% 43.9%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.80e-01 86.4% 70.3%
3kf8A00 2.40.50.1040 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 44.0 3.18e-01 93.9% 44.0%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.54 46.0 4.03e-01 95.5% 90.8%
3hkoA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.54 37.0 2.63e-01 72.7% 96.5%
4hrzB00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 42.0 3.54e-01 89.4% 79.7%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 38.0 3.56e-01 78.8% 89.9%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.60e-01 90.9% 68.1%
4ifsA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.53 44.0 3.57e-01 95.5% 87.1%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 38.0 3.86e-01 78.8% 84.8%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.52 36.0 2.96e-01 75.8% 48.6%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.58e-01 89.4% 79.8%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.39e-01 92.4% 72.7%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.51 42.0 3.49e-01 95.5% 80.3%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 37.0 3.04e-01 83.3% 63.9%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3612106 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 48.0 4.66e-01 90.9% 58.7%
3744517 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.71 50.0 4.08e-01 92.4% 40.8%
331968 4.1.1.55 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1653 0.67 51.0 4.83e-01 81.8% 82.1%
3719807 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.65 47.0 3.72e-01 92.4% 36.4%
180375 705.1.1.1 ↗ beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH 0.62 54.0 4.62e-01 98.5% 64.8%
3242138 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.61 41.0 4.29e-01 92.4% 76.7%
4021411 705.1.1.1 ↗ beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH 0.61 53.0 4.42e-01 97.0% 63.5%
3720549 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.59 36.0 4.16e-01 77.3% 100.0%
3504767 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.59 41.0 4.08e-01 89.4% 70.0%
3609520 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 41.0 3.67e-01 74.2% 64.2%
4990492 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 4.55e-01 80.3% 100.0%
3516854 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 44.0 3.74e-01 86.4% 77.4%
4345301 1.1.5.44 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head 0.57 45.0 3.40e-01 86.4% 89.4%
4606510 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.57 45.0 4.16e-01 89.4% 68.2%
3501287 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 34.0 3.92e-01 75.8% 95.0%
3444970 2.1.1.223 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.56 46.0 3.74e-01 92.4% 63.8%
3928239 7579.1.1.14 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 0.56 46.0 3.09e-01 97.0% 90.7%
3541088 827.1.1.1 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail 0.55 38.0 3.30e-01 81.8% 45.7%
3832069 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 40.0 4.04e-01 78.8% 78.5%
5037274 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 43.0 3.68e-01 86.4% 61.8%
4971123 304.136.1.0 ↗ a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain 0.55 42.0 3.65e-01 84.8% 95.5%
3695678 3924.1.1.0 ↗ alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.55 41.0 2.51e-01 80.3% 29.8%
3645007 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.55 38.0 3.60e-01 74.2% 70.6%
4026109 220.1.1.21 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SPT16 0.55 44.0 3.69e-01 90.9% 68.3%
3269464 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 44.0 3.79e-01 92.4% 54.5%
4960002 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 3.83e-01 86.4% 64.4%
3803797 220.1.1.181 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP 0.54 42.0 3.50e-01 86.4% 55.8%
5022340 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 42.0 4.14e-01 90.9% 81.4%
4613500 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.54 46.0 2.95e-01 98.5% 32.0%
4155224 9.16.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › Rot1 0.53 46.0 3.54e-01 100.0% 70.6%
3701911 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.53 43.0 3.06e-01 90.9% 34.1%
3275009 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.53 42.0 3.39e-01 90.9% 46.2%
3783958 9.16.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 › Rot1 0.53 46.0 3.51e-01 100.0% 68.5%
3342794 284.1.3.0 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.53 37.0 3.44e-01 74.2% 57.8%
5031715 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.41e-01 89.4% 47.4%
3520868 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.27e-01 86.4% 57.1%
3679340 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.53 46.0 3.96e-01 100.0% 82.7%
3705153 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.43e-01 90.9% 75.6%
3906073 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 42.0 3.65e-01 89.4% 78.1%
3226939 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.77e-01 90.9% 78.0%
3937661 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 36.0 3.65e-01 92.4% 72.3%
3259095 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.54e-01 90.9% 61.7%
3907293 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 44.0 3.80e-01 95.5% 83.8%
3340613 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 40.0 3.79e-01 86.4% 80.0%
3693921 109.4.1.681 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.51 35.0 2.21e-01 74.2% 32.7%
5003966 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.51 39.0 3.92e-01 87.9% 96.9%
4140296 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.50 40.0 3.24e-01 90.9% 43.6%
3515884 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.39e-01 90.9% 78.3%
3927128 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 40.0 3.38e-01 90.9% 53.3%
3439990 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.50 38.0 3.51e-01 86.4% 62.2%
4674129 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.53e-01 90.9% 73.3%