←Back to structures
OQ594354.1__WEV89199.1__X__00012
Bact-VirOQ594354.1__WEV89199.1__X__00012
Identity
- Accession:
- OQ594354 ↗
- Kingdom:
- phage
Quality
55.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-57
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dfxA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.63 | 43.0 | 3.16e-01 | 72.3% | 27.2% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 45.0 | 3.56e-01 | 89.4% | 55.3% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.58 | 50.0 | 4.39e-01 | 100.0% | 75.3% |
| 3isxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.57 | 49.0 | 4.04e-01 | 100.0% | 78.7% |
| 1wgyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 44.0 | 3.98e-01 | 97.9% | 92.1% |
| 1w2lA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.56 | 46.0 | 3.81e-01 | 100.0% | 54.6% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 4.18e-01 | 100.0% | 84.8% |
| 2kqaA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.55 | 37.0 | 2.94e-01 | 74.5% | 50.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 44.0 | 4.12e-01 | 100.0% | 92.4% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 42.0 | 3.12e-01 | 87.2% | 39.6% |
| 1mgpA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 40.0 | 2.85e-01 | 80.9% | 34.2% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 41.0 | 3.10e-01 | 95.7% | 83.2% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.52e-01 | 97.9% | 78.8% |
| 4zy7A00 | 3.30.1050.40 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › | 0.53 | 39.0 | 3.08e-01 | 87.2% | 95.0% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 40.0 | 3.82e-01 | 91.5% | 82.8% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.52 | 41.0 | 3.78e-01 | 100.0% | 93.1% |
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.16e-01 | 70.2% | 72.1% |
| 7b0xI01 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 42.0 | 3.14e-01 | 97.9% | 98.5% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 2.78e-01 | 89.4% | 59.0% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 39.0 | 3.14e-01 | 100.0% | 88.0% |
| 1cr5A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.50 | 42.0 | 3.64e-01 | 95.7% | 97.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950662 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.65 | 49.0 | 3.18e-01 | 83.0% | 21.0% |
| 5024154 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 53.0 | 4.38e-01 | 91.5% | 85.9% |
| 4999166 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 51.0 | 4.38e-01 | 89.4% | 93.3% |
| 5046975 | 1.1.7.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C | 0.62 | 51.0 | 4.29e-01 | 91.5% | 87.5% |
| 3936814 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.61 | 49.0 | 4.01e-01 | 100.0% | 83.8% |
| 5026975 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.60 | 46.0 | 3.02e-01 | 85.1% | 21.0% |
| 3234172 | 1.1.7.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › eEFSec_4th | 0.60 | 48.0 | 3.94e-01 | 91.5% | 84.4% |
| 3974368 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.57 | 41.0 | 2.78e-01 | 100.0% | 18.6% |
| 3386704 | 221.8.1.3 ↗ | a+b two layers › beta-Grasp › GfcC › GfcC › SLBB | 0.55 | 42.0 | 3.70e-01 | 100.0% | 54.7% |
| 3714105 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.55 | 45.0 | 3.10e-01 | 100.0% | 69.6% |
| 4877105 | 2486.1.1.7 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S41 | 0.54 | 39.0 | 2.67e-01 | 80.9% | 60.5% |
| 4957144 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.53 | 36.0 | 3.82e-01 | 93.6% | 82.5% |
| 3690276 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.53 | 39.0 | 2.48e-01 | 93.6% | 19.2% |
| 3346140 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 41.0 | 3.41e-01 | 95.7% | 85.3% |
| 3377430 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.51 | 40.0 | 3.94e-01 | 97.9% | 85.5% |
| 4410402 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.50 | 40.0 | 3.23e-01 | 100.0% | 88.2% |
D2
high
residues 73-178