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OQ594354.1__WEV89201.1__X__00014
Bact-VirOQ594354.1__WEV89201.1__X__00014
Identity
- Accession:
- OQ594354 ↗
- Kingdom:
- phage
Quality
92.9
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 132-248
Domain cluster:
rep: JSantini_GMIN_scaffold_8_prodigal-single.1__X__X__00003__D17-151
D2
medium
residues 43-72
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jdmB01 | 6.20.30.10 | Special › Other non-globular › Pemi-like Protein 1; Chain: D › | 0.63 | 46.0 | 4.21e-01 | 96.7% | 59.1% |
| 3l50A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.62 | 43.0 | 2.95e-01 | 83.3% | 28.7% |
| 2ghfA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.61 | 42.0 | 3.29e-01 | 86.7% | 56.2% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 45.0 | 3.39e-01 | 100.0% | 37.0% |
| 1gzeA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.58 | 44.0 | 2.80e-01 | 93.3% | 54.1% |
| 5jxsA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 44.0 | 2.91e-01 | 100.0% | 100.0% |
| 2m85A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 37.0 | 3.24e-01 | 86.7% | 46.2% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 36.0 | 3.58e-01 | 86.7% | 64.3% |
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 3.49e-01 | 100.0% | 68.2% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 38.0 | 2.71e-01 | 90.0% | 27.6% |
| 2bzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 36.0 | 2.32e-01 | 93.3% | 39.3% |
| 3hwuA00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.51 | 40.0 | 2.72e-01 | 100.0% | 82.6% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.51 | 35.0 | 2.32e-01 | 100.0% | 23.9% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.50 | 35.0 | 2.98e-01 | 100.0% | 55.1% |
| 1kloA01 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.50 | 37.0 | 3.28e-01 | 100.0% | 41.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250496 | 388.1.1.0 ↗ | few secondary structure elements › Huristasin-like › Huristasin-like › Huristasin-like | 0.63 | 45.0 | 4.45e-01 | 86.7% | 74.3% |
| 3764618 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.62 | 42.0 | 3.52e-01 | 83.3% | 42.9% |
| 3483120 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.62 | 47.0 | 3.95e-01 | 100.0% | 93.8% |
| 3397117 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.61 | 45.0 | 3.77e-01 | 90.0% | 53.8% |
| 3489111 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.61 | 46.0 | 2.81e-01 | 100.0% | 18.0% |
| 3981421 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.58 | 44.0 | 3.13e-01 | 100.0% | 36.8% |
| 3512107 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.57 | 45.0 | 4.21e-01 | 96.7% | 100.0% |
| 4444512 | 394.1.1.2 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 | 0.56 | 43.0 | 4.00e-01 | 100.0% | 71.1% |
| 4544763 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.56 | 40.0 | 2.87e-01 | 96.7% | 36.2% |
| 3980689 | 4212.1.1.1 ↗ | beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N | 0.56 | 43.0 | 3.02e-01 | 100.0% | 35.2% |
| 3622736 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 40.0 | 2.39e-01 | 100.0% | 14.3% |
| 3998140 | 387.1.1.34 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › EB | 0.55 | 43.0 | 3.88e-01 | 100.0% | 86.0% |
| 3517126 | 387.1.3.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like | 0.55 | 40.0 | 3.76e-01 | 80.0% | 72.1% |
| 3483119 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.55 | 41.0 | 3.93e-01 | 93.3% | 100.0% |
| 4183108 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 43.0 | 2.79e-01 | 100.0% | 75.0% |
| 3360382 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.54 | 38.0 | 2.52e-01 | 86.7% | 43.9% |
| 3601410 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 37.0 | 2.31e-01 | 86.7% | 59.6% |
| 3591675 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 40.0 | 2.37e-01 | 100.0% | 16.3% |
| 3710412 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.52 | 40.0 | 2.36e-01 | 100.0% | 15.8% |
| 3604611 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.52 | 36.0 | 2.96e-01 | 100.0% | 72.2% |
| 4314405 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.51 | 35.0 | 2.22e-01 | 80.0% | 13.1% |
| 3594333 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.51 | 36.0 | 3.52e-01 | 86.7% | 82.5% |
| 4079036 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.51 | 34.0 | 2.16e-01 | 80.0% | 13.1% |
| 3234730 | 387.1.7.1 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Evasin-3 knottin scaffold › Lustrin_cystein | 0.50 | 35.0 | 3.52e-01 | 76.7% | 77.1% |
D3
medium
residues 77-129
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gyiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 31.0 | 2.56e-01 | 71.7% | 25.8% |
| 1p4xA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 37.0 | 2.87e-01 | 88.7% | 26.0% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.57 | 45.0 | 3.19e-01 | 100.0% | 31.8% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 35.0 | 2.71e-01 | 79.2% | 27.0% |
| 1pc6A00 | 1.10.3790.10 | Mainly Alpha › Orthogonal Bundle › NinB fold › NinB | 0.52 | 37.0 | 2.79e-01 | 75.5% | 73.0% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.52 | 35.0 | 2.68e-01 | 71.7% | 51.0% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.51 | 35.0 | 2.90e-01 | 71.7% | 71.0% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.09e-01 | 79.2% | 57.0% |
| 1jgsA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 2.66e-01 | 75.5% | 47.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 34.0 | 2.27e-01 | 77.4% | 11.6% |
| 4973074 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.58 | 47.0 | 3.24e-01 | 90.6% | 53.5% |
| 3240369 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.54 | 40.0 | 2.59e-01 | 83.0% | 39.6% |
| 5018603 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.54 | 38.0 | 2.47e-01 | 73.6% | 48.2% |
| 4032753 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.53 | 33.0 | 2.43e-01 | 86.8% | 22.9% |
| 7698 | 829.1.1.1 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB | 0.52 | 37.0 | 2.79e-01 | 75.5% | 73.0% |
| 3989750 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.52 | 36.0 | 2.91e-01 | 75.5% | 43.9% |
| 3488211 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.52 | 39.0 | 3.34e-01 | 83.0% | 73.3% |
| 3892941 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 45.0 | 2.81e-01 | 100.0% | 37.3% |
| 3954346 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.51 | 36.0 | 2.26e-01 | 73.6% | 37.3% |
| 5062590 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.51 | 37.0 | 2.70e-01 | 77.4% | 44.0% |
| 4031872 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.51 | 35.0 | 2.64e-01 | 75.5% | 44.8% |
| 3234497 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.51 | 38.0 | 2.49e-01 | 84.9% | 41.5% |
| 3279206 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.51 | 35.0 | 2.74e-01 | 77.4% | 37.9% |
| 3899209 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 38.0 | 2.67e-01 | 84.9% | 59.5% |
| 2728156 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 37.0 | 2.53e-01 | 79.2% | 58.9% |