←Back to structures
OQ594354.1__WEV89234.1__X__00047
Bact-VirOQ594354.1__WEV89234.1__X__00047
Identity
- Accession:
- OQ594354 ↗
- Kingdom:
- phage
Quality
63.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-77
Domain cluster:
rep: HM480106.1__ADP06636.1__S-CBS1_gp31__00031__D5-79
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5u1xA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.60 | 52.0 | 3.54e-01 | 97.4% | 76.0% |
| 2vqeC02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.59 | 42.0 | 3.89e-01 | 97.4% | 57.0% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.58 | 46.0 | 3.81e-01 | 98.7% | 48.9% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 34.0 | 3.19e-01 | 89.5% | 48.9% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.57 | 50.0 | 3.80e-01 | 96.1% | 70.1% |
| 2fh5A01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 43.0 | 3.68e-01 | 92.1% | 51.6% |
| 3pxpA02 | 3.30.450.180 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 46.0 | 3.43e-01 | 96.1% | 78.9% |
| 1jw3A00 | 3.55.10.10 | Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain | 0.53 | 36.0 | 2.98e-01 | 89.5% | 38.6% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 43.0 | 3.44e-01 | 92.1% | 60.1% |
| 2v94B00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 36.0 | 3.43e-01 | 72.4% | 87.1% |
| 2joqA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 32.0 | 3.31e-01 | 100.0% | 61.3% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 44.0 | 3.59e-01 | 92.1% | 89.1% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 2.78e-01 | 81.6% | 47.9% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.18e-01 | 100.0% | 51.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3512956 | 3914.1.1.11 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoct_dimer | 0.59 | 41.0 | 4.00e-01 | 97.4% | 65.5% |
| 5020004 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.57 | 35.0 | 3.60e-01 | 89.5% | 64.0% |
| 4989528 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.56 | 50.0 | 4.32e-01 | 97.4% | 80.0% |
| 5005033 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.55 | 36.0 | 3.53e-01 | 88.2% | 63.7% |
| 5042625 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.54 | 38.0 | 3.53e-01 | 72.4% | 85.3% |
| 3176771 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.54 | 46.0 | 3.02e-01 | 100.0% | 68.2% |
| 4669035 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.54 | 44.0 | 3.69e-01 | 96.1% | 95.2% |
| 4997522 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.53 | 34.0 | 3.40e-01 | 89.5% | 62.5% |
| None | — | 0.53 | 40.0 | 2.91e-01 | 81.6% | 51.1% | |
| 5041249 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 36.0 | 3.74e-01 | 90.8% | 77.1% |
| 3240948 | 220.1.1.60 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ECT2_PH | 0.53 | 38.0 | 2.88e-01 | 76.3% | 92.1% |
| 5034761 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.53 | 37.0 | 3.35e-01 | 73.7% | 78.1% |
| 5047435 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 46.0 | 3.71e-01 | 96.1% | 62.5% |
| 4945933 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.52 | 34.0 | 2.99e-01 | 100.0% | 41.7% |
| 4503821 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.52 | 36.0 | 3.70e-01 | 100.0% | 78.6% |
| 4296415 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 38.0 | 3.50e-01 | 77.6% | 85.0% |
| 4066506 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 38.0 | 3.42e-01 | 76.3% | 80.0% |
| 4265436 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 36.0 | 3.35e-01 | 73.7% | 81.0% |
| 5049105 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 38.0 | 3.37e-01 | 78.9% | 73.0% |
| 3598322 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.52 | 41.0 | 3.47e-01 | 89.5% | 100.0% |
| 5058995 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 36.0 | 3.41e-01 | 73.7% | 86.3% |
| 3929061 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.52 | 39.0 | 3.60e-01 | 94.7% | 63.2% |
| 4206503 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.52 | 39.0 | 3.39e-01 | 81.6% | 70.8% |
| 4538961 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.51 | 36.0 | 3.68e-01 | 100.0% | 74.7% |
| 4320249 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.51 | 36.0 | 3.30e-01 | 73.7% | 81.0% |
| 3985634 | 3313.1.1.1 ↗ | a+b two layers › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › Uncharacterized protein VC_A0919 › DUF406 | 0.51 | 36.0 | 3.32e-01 | 100.0% | 57.0% |
| 3279792 | 2003.1.5.14 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_3 | 0.51 | 38.0 | 2.73e-01 | 78.9% | 47.9% |
| 3472961 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 46.0 | 3.65e-01 | 100.0% | 80.0% |
| 1421655 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.50 | 35.0 | 2.91e-01 | 75.0% | 56.1% |
| 3999424 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.50 | 34.0 | 3.03e-01 | 90.8% | 48.2% |