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OQ594354.1__WEV89235.1__X__00048

Bact-Vir

OQ594354.1__WEV89235.1__X__00048

Identity

Accession:
OQ594354 ↗
Kingdom:
phage

Quality

65.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-77_97-149
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04404.18 best ERF 38.6 1.50e-09 95.8% 73.9%
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.70 62.0 5.81e-01 96.6% 86.5%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 46.0 4.23e-01 71.4% 79.4%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.63 43.0 3.84e-01 71.4% 78.7%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 4.28e-01 79.8% 59.3%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 4.52e-01 78.2% 75.0%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 42.0 3.97e-01 71.4% 77.6%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.61 52.0 4.93e-01 90.8% 89.8%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 4.44e-01 79.8% 73.2%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.60 44.0 4.17e-01 76.5% 68.1%
4jf8A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.60 43.0 4.11e-01 76.5% 67.4%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.59 41.0 3.88e-01 71.4% 76.6%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 45.0 4.29e-01 79.8% 68.8%
2xzmE01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 45.0 4.64e-01 94.1% 82.8%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 43.0 4.31e-01 79.8% 75.0%
2iqiB00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.59 49.0 4.34e-01 89.9% 87.1%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.59 44.0 4.24e-01 79.0% 70.3%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 4.14e-01 79.8% 70.4%
3a76A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 4.25e-01 79.8% 69.8%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.58 47.0 3.77e-01 86.6% 44.9%
5tseA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.58 49.0 4.70e-01 92.4% 91.2%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 4.05e-01 80.7% 74.5%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.57 42.0 4.11e-01 79.0% 72.6%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 3.99e-01 79.8% 78.4%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.84e-01 80.7% 79.4%
1tuhA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.97e-01 89.1% 68.7%
2gtlM02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.56 43.0 3.86e-01 80.7% 94.0%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 4.02e-01 79.8% 69.5%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 42.0 4.08e-01 79.8% 72.2%
2qiyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 41.0 3.99e-01 91.6% 70.1%
1y0gA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.55 43.0 3.86e-01 84.9% 76.9%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 38.0 4.23e-01 92.4% 92.3%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.54 45.0 4.22e-01 92.4% 84.8%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.84e-01 80.7% 70.9%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 40.0 3.93e-01 79.8% 76.7%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 38.0 3.69e-01 89.1% 65.9%
2bi0A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 39.0 3.56e-01 76.5% 85.0%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.52 27.0 2.78e-01 73.9% 49.6%
5w17A01 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.52 42.0 3.89e-01 85.7% 90.7%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 38.0 3.66e-01 79.8% 68.4%
4l8nA03 3.30.160.670 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 44.0 4.05e-01 99.2% 90.9%
3hi7B02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 35.0 3.46e-01 71.4% 82.0%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 37.0 3.65e-01 80.7% 70.8%
2r76A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.50 43.0 4.23e-01 94.1% 90.9%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5039841 330.1.1.36 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › ERF 0.92 81.0 8.44e-01 99.2% 99.1%
4066189 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.72 44.0 5.02e-01 73.1% 83.5%
3262206 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.71 65.0 5.85e-01 99.2% 78.1%
3280323 243.1.1.7 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N 0.70 46.0 4.89e-01 75.6% 75.2%
3786132 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.67 61.0 5.77e-01 100.0% 92.4%
3177367 330.1.1.4 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 0.67 60.0 5.46e-01 98.3% 91.0%
3808882 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.66 46.0 4.06e-01 71.4% 72.6%
5060223 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.63 47.0 3.85e-01 78.2% 43.0%
5038095 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.63 50.0 4.90e-01 99.2% 77.6%
5069076 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.63 48.0 4.84e-01 99.2% 78.3%
5030898 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.63 47.0 4.78e-01 99.2% 78.3%
1146680 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.63 46.0 4.33e-01 76.5% 68.8%
3182995 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 47.0 4.75e-01 79.0% 85.0%
6409 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.62 48.0 4.28e-01 79.8% 59.3%
5034560 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.62 48.0 4.82e-01 99.2% 79.2%
2632036 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.62 46.0 4.43e-01 78.2% 71.7%
5037015 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.62 49.0 4.74e-01 99.2% 74.1%
3443030 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 39.0 4.59e-01 72.3% 96.2%
4932446 504.1.1.0 a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.61 48.0 4.81e-01 99.2% 80.8%
4352488 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.61 45.0 4.15e-01 76.5% 67.1%
3286225 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.61 46.0 4.53e-01 79.8% 73.8%
3838060 7503.1.1.4 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE 0.61 53.0 4.70e-01 93.3% 83.6%
6403 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.60 44.0 4.21e-01 76.5% 70.0%
4892175 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.60 45.0 4.40e-01 80.7% 71.1%
4373837 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.60 45.0 4.30e-01 79.0% 70.0%
4886881 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 45.0 4.36e-01 80.7% 70.3%
1125573 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.60 45.0 4.44e-01 79.8% 74.4%
3056279 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.59 41.0 3.73e-01 71.4% 69.9%
154434 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.59 45.0 4.29e-01 79.8% 68.8%
4333368 243.1.1.42 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MMU163 0.59 44.0 4.34e-01 79.0% 76.2%
4315252 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.58 44.0 4.15e-01 79.8% 69.0%
3280539 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.58 44.0 4.31e-01 79.8% 73.1%
3351848 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 43.0 4.21e-01 79.8% 70.8%
4565299 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.58 43.0 4.05e-01 77.3% 68.1%
4608992 243.1.1.1 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Ring_hydroxyl_B 0.58 43.0 4.00e-01 79.8% 82.3%
4168380 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.58 42.0 4.11e-01 85.7% 69.2%
3596331 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.58 42.0 4.13e-01 79.8% 70.3%
3889571 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.58 41.0 4.10e-01 79.8% 71.5%
3388283 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.57 48.0 4.42e-01 90.8% 95.5%
3798282 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 41.0 4.06e-01 79.8% 71.2%
6384 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.56 40.0 3.97e-01 89.1% 68.7%
3446982 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.56 42.0 4.09e-01 79.8% 70.4%
3848773 243.1.1.13 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.56 43.0 3.88e-01 80.7% 63.0%
1000612 7503.1.1.4 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE 0.56 47.0 4.52e-01 91.6% 96.3%
3386467 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.56 48.0 4.50e-01 95.0% 92.7%
3223708 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 39.0 3.98e-01 76.5% 73.3%
3163625 7503.1.1.4 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LptE 0.55 46.0 4.35e-01 91.6% 86.2%
3610658 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.55 41.0 3.78e-01 79.8% 61.3%
3594207 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.55 41.0 3.91e-01 79.8% 67.6%
3725346 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.54 40.0 3.96e-01 79.8% 71.5%
3962910 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 41.0 3.93e-01 79.8% 74.8%
4481016 243.1.1.6 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › VirB8 0.54 41.0 3.88e-01 79.0% 68.6%
3741071 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.54 40.0 3.81e-01 79.8% 66.4%
4927707 243.1.1.25 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.54 41.0 3.89e-01 79.8% 75.0%
4870077 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.53 40.0 3.85e-01 79.8% 74.5%
3996829 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.52 39.0 3.95e-01 80.7% 80.9%
3241023 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 40.0 2.71e-01 83.2% 98.8%
5019198 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 35.0 3.63e-01 70.6% 100.0%
3978258 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 34.0 3.78e-01 71.4% 87.1%
4022346 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.51 39.0 2.85e-01 80.7% 75.5%
D2 high residues 265-346
PDB