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OQ594355.1__WEV89314.1__H10PHJ05_13__00013
Bact-VirOQ594355.1__WEV89314.1__H10PHJ05_13__00013
Identity
- Accession:
- OQ594355 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-203
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aj0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 21.0 | 3.50e-01 | 75.0% | 83.1% |
| 3lkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.87e-01 | 83.5% | 89.0% |
| 3s1sA02 | 3.40.50.12420 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.32e-01 | 83.0% | 62.9% |
| 1x7oA01 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.50 | 20.0 | 2.82e-01 | 97.5% | 72.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3656887 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 25.0 | 3.58e-01 | 79.5% | 82.1% |
| 3198151 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 28.0 | 3.74e-01 | 81.5% | 93.0% |
| 4255519 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.54 | 42.0 | 3.60e-01 | 83.0% | 78.5% |
| 5053796 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.53 | 42.0 | 3.63e-01 | 83.5% | 92.8% |
| 4946359 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.53 | 41.0 | 3.55e-01 | 79.5% | 83.0% |
| 5027669 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.52 | 42.0 | 3.58e-01 | 83.5% | 79.7% |
| 3839942 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.52 | 41.0 | 3.30e-01 | 80.5% | 81.5% |
| 4937889 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.52 | 42.0 | 3.35e-01 | 84.5% | 83.0% |
| 5032412 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.50 | 41.0 | 3.58e-01 | 88.0% | 82.5% |
D2
high
residues 206-335
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wqsA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 31.0 | 4.14e-01 | 96.2% | 87.1% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.61 | 39.0 | 3.56e-01 | 95.4% | 48.6% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 29.0 | 3.72e-01 | 98.5% | 78.7% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 37.0 | 4.05e-01 | 91.5% | 74.8% |
| 5lohB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 31.0 | 3.95e-01 | 90.0% | 89.2% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 30.0 | 3.77e-01 | 70.0% | 84.0% |
| 1sc6A03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 35.0 | 4.27e-01 | 80.8% | 96.3% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 27.0 | 3.31e-01 | 97.7% | 74.4% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.54 | 38.0 | 4.18e-01 | 96.9% | 88.6% |
| 6u6pA01 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.53 | 32.0 | 3.93e-01 | 91.5% | 100.0% |
| 2qziA00 | 3.40.1720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Streptococcus thermophilus LMG 18311 protein like › Streptococcus thermophilus LMG 18311 protein like | 0.52 | 37.0 | 4.13e-01 | 99.2% | 95.0% |
| 3encA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 26.0 | 3.17e-01 | 74.6% | 73.4% |
| 3cx5B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 35.0 | 3.54e-01 | 70.0% | 84.4% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 42.0 | 3.47e-01 | 90.8% | 96.9% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.51 | 33.0 | 3.70e-01 | 93.8% | 83.7% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.50 | 35.0 | 3.39e-01 | 70.8% | 88.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961473 | 304.165.1.2 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT | 0.75 | 44.0 | 4.27e-01 | 100.0% | 52.4% |
| 5038508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.74 | 34.0 | 4.17e-01 | 81.5% | 67.1% |
| 5026275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 34.0 | 3.99e-01 | 93.8% | 64.4% |
| 5081052 | 307.1.1.5 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15_3 | 0.69 | 62.0 | 6.03e-01 | 98.5% | 93.8% |
| 3607364 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 32.0 | 3.46e-01 | 83.8% | 52.2% |
| 3932127 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 36.0 | 3.98e-01 | 70.0% | 67.6% |
| 4113878 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.61 | 30.0 | 3.90e-01 | 98.5% | 84.3% |
| 4930688 | 330.2.1.4 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › DUF2113 | 0.61 | 41.0 | 4.43e-01 | 96.9% | 83.8% |
| 4393799 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.60 | 29.0 | 3.80e-01 | 98.5% | 84.3% |
| 3968519 | 319.3.1.1 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN | 0.59 | 33.0 | 3.57e-01 | 70.8% | 62.7% |
| 4939669 | 330.2.1.4 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › DUF2113 | 0.59 | 38.0 | 4.24e-01 | 96.9% | 85.0% |
| 5012467 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.58 | 40.0 | 4.30e-01 | 91.5% | 81.8% |
| 3973568 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.58 | 36.0 | 4.10e-01 | 75.4% | 84.2% |
| 1667689 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.58 | 39.0 | 4.31e-01 | 70.0% | 85.0% |
| 3080497 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.57 | 28.0 | 3.69e-01 | 98.5% | 88.1% |
| 3589979 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.57 | 41.0 | 4.43e-01 | 75.4% | 100.0% |
| 3974782 | 304.28.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › ACR_tran | 0.57 | 35.0 | 3.93e-01 | 76.9% | 82.1% |
| 4989614 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.57 | 31.0 | 4.05e-01 | 91.5% | 98.6% |
| 3965026 | 319.3.1.1 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN | 0.55 | 31.0 | 3.48e-01 | 73.1% | 70.0% |
| 3901284 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 35.0 | 3.46e-01 | 90.8% | 60.7% |
| 3999603 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 28.0 | 3.23e-01 | 90.0% | 65.0% |
| 3620547 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.55 | 35.0 | 3.75e-01 | 82.3% | 75.5% |
| 3838015 | 319.3.1.3 ↗ | beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › DUF7494 | 0.54 | 33.0 | 3.39e-01 | 70.0% | 60.8% |
| 4367626 | 12.3.1.8 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N | 0.53 | 44.0 | 3.54e-01 | 90.8% | 95.8% |
| 4174868 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 43.0 | 2.74e-01 | 89.2% | 33.5% |
| 5008353 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.52 | 32.0 | 3.35e-01 | 100.0% | 65.0% |
| 4962332 | 304.165.1.2 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT | 0.51 | 41.0 | 3.93e-01 | 93.8% | 72.3% |