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OQ594355.1__WEV89332.1__H10PHJ05_31__00031

Bact-Vir

OQ594355.1__WEV89332.1__H10PHJ05_31__00031

Identity

Accession:
OQ594355 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-131
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14550.12 best Peptidase_S78_2 68.3 9.40e-19 95.0% 90.7%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qf4A01 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.65 40.0 4.72e-01 100.0% 93.7%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.64 41.0 4.31e-01 82.5% 72.6%
1m1hA01 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.64 37.0 4.03e-01 86.7% 69.0%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.63 40.0 4.56e-01 95.8% 87.2%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 34.0 4.25e-01 85.8% 86.3%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 34.0 4.23e-01 86.7% 88.9%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.61 31.0 3.92e-01 83.3% 83.6%
1a7gE00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 36.0 4.27e-01 87.5% 85.4%
5ixuA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 41.0 4.42e-01 87.5% 82.4%
3im9A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.60 33.0 4.04e-01 89.2% 86.5%
1y7pB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 35.0 4.18e-01 84.2% 87.5%
2awnC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 27.0 3.74e-01 95.0% 87.9%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 26.0 3.34e-01 95.8% 71.9%
2jfdA03 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.58 29.0 3.73e-01 81.7% 83.3%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.58 32.0 3.92e-01 89.2% 86.3%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 28.0 3.37e-01 95.0% 68.9%
1vqyB01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 40.0 4.44e-01 85.8% 89.5%
2qcpX01 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.57 28.0 3.47e-01 92.5% 73.3%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.57 39.0 4.35e-01 85.8% 93.2%
2j5aA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.57 39.0 4.09e-01 82.5% 77.4%
5v7qT00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 43.0 4.72e-01 91.7% 98.0%
8cwoF01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.57 38.0 4.28e-01 83.3% 90.0%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 30.0 3.70e-01 82.5% 81.1%
2cpiA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 35.0 4.12e-01 84.2% 92.6%
1cqmA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.56 38.0 4.09e-01 83.3% 82.7%
2jdjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 39.0 4.11e-01 85.0% 80.8%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 30.0 3.68e-01 84.2% 83.8%
1r6yA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 40.0 4.30e-01 86.7% 87.4%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 3.52e-01 81.7% 68.7%
3mahA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.55 30.0 3.72e-01 84.2% 89.9%
3bb5A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 39.0 4.18e-01 88.3% 85.4%
1vmbA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.55 37.0 3.97e-01 83.3% 78.5%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 35.0 3.75e-01 85.0% 72.6%
6ruiB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.54 40.0 3.95e-01 75.8% 95.2%
4he6A00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 37.0 4.19e-01 97.5% 95.5%
2d5wA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.53 47.0 4.82e-01 96.7% 100.0%
3pqiA01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.53 30.0 3.49e-01 95.8% 78.0%
1mwqA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.53 36.0 3.87e-01 85.8% 83.0%
6wubf01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.53 36.0 3.99e-01 82.5% 88.3%
3wnzA04 3.90.1170.60 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › 0.53 39.0 4.32e-01 85.8% 97.9%
2bh8B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 26.0 3.45e-01 95.0% 98.2%
1dx5M02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 39.0 3.95e-01 92.5% 79.8%
2rilA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.96e-01 82.5% 89.5%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.84e-01 100.0% 67.5%
4rl1A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.50 27.0 3.34e-01 80.8% 85.9%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 30.0 3.12e-01 95.8% 63.3%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 29.0 3.32e-01 95.8% 77.0%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928896 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 31.0 3.27e-01 94.2% 50.9%
4050326 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.61 32.0 3.82e-01 89.2% 73.8%
3963302 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.61 47.0 4.92e-01 98.3% 92.4%
3244963 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 32.0 3.58e-01 95.0% 63.2%
4060458 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.61 36.0 4.30e-01 84.2% 87.5%
3378042 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.61 33.0 3.93e-01 86.7% 78.8%
4961623 304.8.1.115 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › T2SSM_b 0.61 39.0 4.42e-01 88.3% 86.7%
4592275 304.9.1.45 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4732 0.60 40.0 3.87e-01 89.2% 59.3%
5021963 304.8.1.116 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF3303 0.59 33.0 3.51e-01 83.3% 60.0%
3612838 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 33.0 3.73e-01 96.7% 71.1%
3212560 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 31.0 3.83e-01 97.5% 82.9%
3189075 304.9.1.1 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.59 40.0 4.09e-01 89.2% 70.0%
5012955 1.1.7.128 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF515 0.59 39.0 4.45e-01 84.2% 92.9%
3700732 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 31.0 3.51e-01 95.0% 64.2%
4524153 304.22.1.1 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.59 32.0 3.73e-01 86.7% 74.1%
4313045 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.58 39.0 4.38e-01 83.3% 88.3%
138899 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 33.0 3.84e-01 84.2% 80.0%
3504328 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.58 35.0 4.18e-01 82.5% 90.0%
4929350 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 34.0 4.00e-01 83.3% 85.0%
5070441 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 25.0 3.10e-01 93.3% 62.9%
5015739 304.24.1.44 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PF27325 0.58 34.0 3.56e-01 81.7% 62.7%
3994249 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.57 38.0 3.53e-01 85.0% 51.6%
3428826 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 34.0 3.98e-01 87.5% 86.3%
4927015 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 36.0 4.18e-01 83.3% 93.8%
3388031 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 36.0 4.20e-01 85.8% 93.8%
4201083 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.57 38.0 4.09e-01 83.3% 81.0%
3829171 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 36.0 3.56e-01 95.0% 59.2%
4248583 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 37.0 3.79e-01 83.3% 66.7%
3487475 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 32.0 3.67e-01 81.7% 76.5%
4213698 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 3.98e-01 83.3% 74.5%
4296360 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 4.19e-01 82.5% 86.3%
3783729 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.56 32.0 3.84e-01 84.2% 86.7%
4258266 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 3.95e-01 83.3% 72.2%
4438032 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 4.20e-01 83.3% 87.2%
3282643 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 35.0 4.08e-01 84.2% 92.5%
5083720 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 30.0 3.58e-01 92.5% 76.2%
4141632 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 4.19e-01 84.2% 87.4%
4984616 1.1.7.18 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Fucose_iso_C 0.56 50.0 4.74e-01 96.7% 84.2%
4109316 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 3.95e-01 84.2% 72.8%
4349987 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.56 38.0 4.21e-01 83.3% 87.4%
3281705 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 43.0 4.68e-01 86.7% 99.0%
4069527 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.56 35.0 3.97e-01 90.0% 88.2%
5027174 304.136.1.0 a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain 0.56 49.0 4.68e-01 98.3% 82.9%
3250928 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 34.0 4.01e-01 80.8% 91.3%
3957568 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 42.0 4.51e-01 85.0% 96.0%
4056962 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.55 38.0 3.94e-01 84.2% 76.1%
4628567 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.55 37.0 3.77e-01 83.3% 69.6%
4121888 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.55 36.0 4.07e-01 83.3% 87.8%
4928686 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 35.0 3.97e-01 83.3% 85.6%
2553760 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.55 43.0 4.58e-01 91.7% 97.2%
4396929 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.54 37.0 3.87e-01 83.3% 74.5%
3957859 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.54 44.0 3.98e-01 87.5% 89.7%
4135921 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.54 37.0 4.07e-01 83.3% 87.4%
4062697 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.54 37.0 3.47e-01 83.3% 55.3%
4170530 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.54 37.0 4.06e-01 83.3% 87.4%
4016178 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.54 34.0 3.73e-01 91.7% 77.9%
4506614 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.54 37.0 3.86e-01 83.3% 76.1%
3169095 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.54 28.0 3.29e-01 95.8% 70.6%
3520250 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.53 37.0 4.02e-01 83.3% 85.0%
3208585 2.1.1.59 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 0.53 33.0 3.57e-01 95.0% 73.0%
3564603 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 38.0 4.14e-01 83.3% 92.6%
3591158 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 31.0 3.12e-01 95.8% 55.2%
4466140 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.53 36.0 3.46e-01 83.3% 58.6%
4610999 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.53 37.0 3.97e-01 95.0% 87.0%
4642439 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.53 37.0 4.01e-01 85.8% 87.0%
3611062 2.1.1.3 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.53 31.0 3.21e-01 95.8% 60.7%
3586555 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 30.0 3.50e-01 95.8% 78.8%
4998823 304.4.1.10 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF1330 0.51 35.0 3.82e-01 86.7% 87.4%
3201221 2.1.1.4 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 0.51 28.0 3.01e-01 96.7% 59.0%
3700345 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 32.0 3.37e-01 95.8% 68.2%
5068697 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.51 33.0 3.56e-01 84.2% 76.2%
D2 medium residues 135-204
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7odhL01 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.68 52.0 3.10e-01 82.9% 97.0%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 53.0 4.24e-01 87.1% 62.4%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.64 54.0 4.73e-01 94.3% 96.2%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.63 43.0 2.55e-01 70.0% 16.0%
3c19A02 3.10.20.300 Alpha Beta › Roll › Ubiquitin-like (UB roll) › mk0293 like domain 0.63 48.0 4.70e-01 84.3% 98.7%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.63 43.0 3.40e-01 71.4% 57.9%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.62 49.0 4.60e-01 87.1% 98.9%
1q48A00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.62 53.0 4.41e-01 100.0% 87.3%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.61 43.0 3.99e-01 94.3% 58.2%
2ichA02 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.59 48.0 3.99e-01 91.4% 94.6%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 3.66e-01 85.7% 62.6%
3aapA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 45.0 3.71e-01 85.7% 99.2%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.58e-01 94.3% 53.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.56 41.0 3.41e-01 81.4% 70.0%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 46.0 3.94e-01 97.1% 56.1%
3mh9A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.55 45.0 3.34e-01 95.7% 40.5%
3n7zA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 40.0 3.19e-01 80.0% 86.6%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.55 37.0 2.73e-01 71.4% 100.0%
1vkcA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 40.0 3.22e-01 75.7% 87.1%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.88e-01 95.7% 87.2%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.54 43.0 2.99e-01 88.6% 43.9%
1e69A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 38.0 2.62e-01 75.7% 38.4%
2z3gB00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.54 39.0 3.27e-01 91.4% 43.3%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 42.0 2.93e-01 90.0% 43.6%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.53 37.0 3.55e-01 74.3% 79.0%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 3.95e-01 97.1% 75.0%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 39.0 3.22e-01 82.9% 42.0%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 40.0 3.39e-01 85.7% 55.6%
2ia1A01 3.30.500.20 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › BH3703-like domains 0.52 39.0 3.37e-01 84.3% 63.9%
1mvpA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 42.0 3.70e-01 94.3% 64.3%
1h7sA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 36.0 2.67e-01 97.1% 26.9%
2w18A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 38.0 2.54e-01 81.4% 24.8%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.51 43.0 3.15e-01 97.1% 56.3%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.51 41.0 3.00e-01 94.3% 31.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.72e-01 88.6% 79.7%
2fr5A00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 37.0 3.06e-01 91.4% 41.2%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.51 43.0 3.39e-01 91.4% 47.8%
2qdeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 40.0 3.29e-01 90.0% 96.3%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4551329 3518.1.1.1 a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind 0.69 57.0 4.60e-01 92.9% 80.7%
2392667 9.11.1.3 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › Nm-ACP 0.68 54.0 4.75e-01 87.1% 93.2%
5012323 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 53.0 3.31e-01 87.1% 52.5%
2997059 9.13.1.5 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like 0.65 49.0 4.07e-01 84.3% 80.9%
4935912 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.64 52.0 5.25e-01 87.1% 95.7%
4975236 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.63 51.0 5.32e-01 87.1% 96.9%
5076192 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.62 51.0 5.03e-01 88.6% 94.6%
4524698 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.62 49.0 5.14e-01 85.7% 98.5%
4929236 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.62 49.0 4.93e-01 85.7% 94.3%
223827 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.62 48.0 4.69e-01 85.7% 98.7%
5031772 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.62 49.0 4.81e-01 85.7% 84.0%
5022885 5.1.4.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.61 45.0 2.80e-01 81.4% 19.1%
4992060 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.61 45.0 3.47e-01 81.4% 89.7%
3816864 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 44.0 3.74e-01 100.0% 45.0%
4963032 244.2.1.15 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › TSCPD 0.61 48.0 4.22e-01 88.6% 94.5%
4982570 3604.1.1.1 a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion 0.61 49.0 4.96e-01 87.1% 95.7%
3769507 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.60 46.0 4.69e-01 100.0% 85.7%
4877157 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.60 47.0 3.09e-01 87.1% 26.9%
902 4252.1.1.1 beta barrels › AttH-like › AttH-like › AttH-like › CrtC 0.60 48.0 3.99e-01 91.4% 93.9%
4520769 7579.1.1.9 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase 0.59 48.0 3.19e-01 88.6% 47.4%
3350373 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.58 46.0 3.09e-01 90.0% 37.0%
1099835 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.57 43.0 3.78e-01 81.4% 53.8%
3500713 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.57 47.0 3.97e-01 94.3% 74.4%
3968457 101.15.1.2 alpha arrays › HTH › LysM domain › LysM domain › OapA 0.56 39.0 3.74e-01 74.3% 100.0%
3596303 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.56 39.0 3.84e-01 74.3% 92.0%
4129145 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.55 41.0 2.77e-01 80.0% 28.4%
5064407 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 40.0 2.71e-01 77.1% 46.1%
4278307 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.55 46.0 3.46e-01 97.1% 73.7%
4284812 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.54 40.0 3.16e-01 81.4% 91.3%
3233672 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.54 45.0 4.02e-01 94.3% 73.0%
4448380 2492.1.1.1 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.54 39.0 3.32e-01 91.4% 45.8%
3205721 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 37.0 3.74e-01 74.3% 100.0%
4959370 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.53 45.0 3.41e-01 94.3% 81.0%
4544770 2492.1.1.1 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.53 39.0 3.20e-01 91.4% 40.7%
3627777 71.1.1.19 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 0.53 45.0 3.09e-01 94.3% 73.3%
3853657 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 3.73e-01 94.3% 62.7%
4958749 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 43.0 3.20e-01 94.3% 95.3%
3474675 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.52 43.0 2.89e-01 100.0% 45.3%
3823206 10.1.1.58 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin 0.52 36.0 2.47e-01 74.3% 60.4%
5035835 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.51 39.0 4.09e-01 85.7% 98.3%
2448551 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 36.0 3.12e-01 77.1% 74.8%
3209104 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 40.0 2.67e-01 90.0% 23.9%