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OQ594355.1__WEV89363.1__H10PHJ05_62__00062

Bact-Vir

OQ594355.1__WEV89363.1__H10PHJ05_62__00062

Identity

Accession:
OQ594355 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_HJ05

TaxID: 3035942

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-139
PDB
Domain cluster: rep: NC_041875.1__YP_009594310.1__FDG92_gp21__00021__D5-180
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01510.31 best Amidase_2 47.3 3.60e-12 94.4% 93.0%
D2 high residues 167-225
PDB
Domain cluster: rep: MW388005.1__QQO39020.1__X__00046__D8-66
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01471.24 best PG_binding_1 60.7 1.80e-16 91.5% 80.7%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bkhA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.92 88.0 7.53e-01 100.0% 72.1%
4c2dA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.91 86.0 7.41e-01 100.0% 72.9%
4g54A02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.91 86.0 7.91e-01 100.0% 86.1%
1lbuA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.90 85.0 7.35e-01 100.0% 83.3%
4bolA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.83 73.0 6.54e-01 94.9% 73.8%
7aj9A01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.80 69.0 6.66e-01 94.9% 92.5%
1ck7A01 3.40.390.10 Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) 0.76 65.0 4.25e-01 93.2% 61.3%
1eakA01 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.75 65.0 6.37e-01 94.9% 92.1%
2dk4A00 4.10.280.110 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Pre-mRNA processing factor 4 domain 0.61 43.0 3.94e-01 72.9% 76.3%
3tmpA01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 46.0 3.56e-01 100.0% 47.3%
3bf5A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.54 38.0 2.59e-01 74.6% 89.1%
4bouA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 44.0 3.47e-01 100.0% 51.8%
3d5lA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 35.0 3.65e-01 76.3% 76.9%
2yksA02 1.20.58.390 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain 0.51 37.0 3.01e-01 78.0% 47.9%
2bl7A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.51 40.0 3.73e-01 89.8% 91.1%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.50 35.0 3.10e-01 74.6% 70.5%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3291401 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.94 90.0 7.74e-01 100.0% 72.9%
3957237 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.94 88.0 7.95e-01 98.3% 94.7%
3959835 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.93 85.0 7.91e-01 94.9% 84.3%
3955223 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.93 88.0 7.80e-01 100.0% 90.0%
1165079 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 88.0 7.23e-01 100.0% 64.6%
5019285 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 88.0 7.25e-01 100.0% 67.4%
4032027 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 87.0 7.52e-01 100.0% 72.9%
4473649 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 85.0 7.35e-01 98.3% 78.8%
4117418 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 82.0 8.16e-01 93.2% 96.7%
1498420 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.92 87.0 7.86e-01 100.0% 80.3%
4173379 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.91 85.0 7.56e-01 100.0% 80.0%
224034 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.91 86.0 7.54e-01 100.0% 76.5%
3275963 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.90 84.0 7.15e-01 100.0% 72.2%
4010440 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.90 85.0 7.71e-01 100.0% 85.3%
3395 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.90 85.0 7.39e-01 100.0% 84.3%
3356981 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.88 82.0 7.29e-01 100.0% 81.2%
2859574 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.87 81.0 7.57e-01 100.0% 84.5%
3299326 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.87 78.0 7.54e-01 96.6% 96.9%
4312892 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.86 79.0 7.88e-01 96.6% 98.3%
4380775 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.85 79.0 5.26e-01 98.3% 30.0%
3319740 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.85 78.0 6.81e-01 100.0% 77.6%
4600634 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 70.0 7.01e-01 91.5% 100.0%
1877329 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.83 74.0 6.76e-01 96.6% 78.9%
4055540 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 75.0 7.12e-01 100.0% 92.8%
3221065 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.82 71.0 6.49e-01 93.2% 94.7%
3994858 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 72.0 6.41e-01 96.6% 93.8%
2819638 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 72.0 5.73e-01 100.0% 56.0%
3772398 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.80 74.0 6.60e-01 100.0% 83.7%
3933825 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 69.0 6.34e-01 94.9% 89.3%
3930763 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.79 71.0 6.53e-01 98.3% 90.7%
3772718 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.78 69.0 6.01e-01 94.9% 77.6%
3893524 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.77 67.0 6.31e-01 93.2% 91.4%
3621525 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.76 66.0 6.05e-01 93.2% 97.3%
4160453 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.76 65.0 6.11e-01 93.2% 90.0%
3247155 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.73 63.0 6.11e-01 96.6% 93.8%
4262263 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.72 63.0 5.88e-01 98.3% 97.3%
3938667 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 39.0 3.49e-01 76.3% 63.3%
3699072 6126.1.1.1 ↗ alpha bundles › Helical domain in EHD2 › Helical domain in EHD2 › Helical domain in EHD2 › DUF5600 0.52 42.0 3.37e-01 91.5% 64.2%