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OQ622092.1__WGH28225.1__10KY502B_gene0024__00007

Bact-Vir

OQ622092.1__WGH28225.1__10KY502B_gene0024__00007

Identity

Accession:
OQ622092 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 51-115
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.16e-01 100.0% 55.2%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.40e-01 100.0% 61.5%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.59e-01 100.0% 73.1%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.80e-01 100.0% 52.5%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.78e-01 100.0% 45.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.89e-01 100.0% 57.6%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 5.36e-01 100.0% 79.7%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.87e-01 100.0% 55.7%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.18e-01 100.0% 65.9%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 4.21e-01 100.0% 39.9%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.77e-01 100.0% 57.3%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.61e-01 100.0% 53.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 59.0 5.27e-01 100.0% 98.9%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 44.0 3.35e-01 73.8% 90.4%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.63 45.0 3.50e-01 76.9% 92.8%
2ns0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 5.03e-01 100.0% 75.0%
1xb4B01 1.10.10.570 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" 0.61 53.0 4.53e-01 100.0% 59.6%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.61 46.0 4.19e-01 100.0% 60.7%
3ktwB00 3.30.56.30 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit 0.60 51.0 4.61e-01 100.0% 71.0%
2fckA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 44.0 3.28e-01 81.5% 64.2%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.27e-01 100.0% 75.5%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.57 50.0 4.20e-01 100.0% 83.5%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.57 44.0 3.97e-01 100.0% 60.2%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 49.0 4.31e-01 100.0% 74.0%
3tebB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.55 45.0 3.15e-01 98.5% 100.0%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 3.37e-01 100.0% 94.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 3.87e-01 100.0% 53.3%
3l7oA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 39.0 3.89e-01 100.0% 73.6%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 39.0 3.44e-01 100.0% 51.5%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 40.0 3.64e-01 98.5% 57.4%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.53 44.0 4.12e-01 100.0% 72.7%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.67e-01 100.0% 57.7%
2vi7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 46.0 3.49e-01 100.0% 50.9%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 38.0 3.61e-01 100.0% 62.7%
1a5zA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.52 39.0 3.05e-01 84.6% 94.0%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 45.0 3.47e-01 100.0% 58.5%
3dr6B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 41.0 3.15e-01 90.8% 79.9%
3tf8B00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.52 41.0 3.07e-01 100.0% 31.5%
5eovA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 3.11e-01 96.9% 81.5%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 37.0 3.64e-01 98.5% 68.8%
1q8bA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 41.0 3.70e-01 100.0% 62.4%
2b25A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 42.0 3.18e-01 96.9% 86.3%
3bm7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.64e-01 100.0% 57.5%
3fk5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.51 40.0 3.33e-01 95.4% 58.6%
3hp7A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 42.0 3.09e-01 100.0% 75.7%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 38.0 3.55e-01 100.0% 62.5%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.50 40.0 3.09e-01 90.8% 50.6%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 44.0 3.25e-01 100.0% 61.0%
4jxqA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 43.0 3.15e-01 96.9% 57.6%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.50 38.0 3.52e-01 100.0% 62.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 68.0 5.91e-01 100.0% 63.2%
5033207 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 64.0 5.10e-01 100.0% 45.6%
4994794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 6.18e-01 100.0% 80.0%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 63.0 5.32e-01 100.0% 55.2%
4977903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 5.55e-01 100.0% 68.8%
4941955 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 67.0 6.04e-01 100.0% 73.3%
5045983 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.75 66.0 5.73e-01 100.0% 64.0%
3853184 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.75 67.0 5.04e-01 100.0% 51.0%
5074554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 4.57e-01 100.0% 32.8%
4978533 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 63.0 4.96e-01 100.0% 46.7%
5048841 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 64.0 5.22e-01 100.0% 53.3%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 63.0 4.52e-01 100.0% 34.1%
3481547 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.72 65.0 4.89e-01 100.0% 50.0%
5002609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.52e-01 100.0% 70.5%
3610083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.18e-01 100.0% 61.0%
3250067 101.1.2.271 alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.70 56.0 4.90e-01 100.0% 58.0%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.70 60.0 4.38e-01 100.0% 35.0%
3250041 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.69 60.0 4.15e-01 100.0% 28.4%
4953964 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.69 62.0 5.17e-01 100.0% 59.1%
4971999 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 62.0 4.97e-01 100.0% 54.4%
5000735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.10e-01 100.0% 33.1%
4025929 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 61.0 5.03e-01 100.0% 59.1%
3788427 101.1.2.207 alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.68 59.0 5.14e-01 100.0% 64.0%
4980453 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 4.56e-01 100.0% 57.8%
3317316 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.68 61.0 4.75e-01 100.0% 47.8%
4968278 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.68 56.0 5.20e-01 100.0% 71.8%
3187460 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.67 54.0 3.91e-01 100.0% 31.4%
4012739 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 54.0 4.27e-01 100.0% 43.0%
3827266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 4.53e-01 100.0% 44.1%
3347816 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.67 58.0 4.87e-01 100.0% 59.1%
4929238 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.66 47.0 4.52e-01 100.0% 65.3%
5014314 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.66 55.0 4.99e-01 100.0% 67.8%
3483771 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.66 57.0 5.03e-01 100.0% 66.3%
164542 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 55.0 4.61e-01 100.0% 53.0%
3316881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 4.32e-01 100.0% 38.2%
3938245 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.66 53.0 3.69e-01 100.0% 27.1%
4971711 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 57.0 4.68e-01 100.0% 55.2%
3580866 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.65 57.0 4.71e-01 100.0% 67.5%
3640260 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.65 53.0 3.75e-01 100.0% 28.8%
3829353 101.1.2.641 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 0.65 57.0 3.37e-01 100.0% 13.5%
3657248 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.65 57.0 4.89e-01 100.0% 64.8%
4117256 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.65 57.0 4.56e-01 100.0% 50.8%
3692895 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.65 52.0 3.57e-01 100.0% 25.2%
3464534 101.1.2.641 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 0.64 56.0 3.30e-01 100.0% 12.3%
4968526 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.64 55.0 4.95e-01 100.0% 70.0%
5014345 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.63 53.0 4.82e-01 100.0% 68.9%
4967950 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 52.0 4.74e-01 100.0% 67.8%
5066201 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.63 52.0 4.56e-01 100.0% 61.0%
4940742 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.61 51.0 4.64e-01 100.0% 69.4%
5076338 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 54.0 3.90e-01 100.0% 37.3%
3738674 101.1.2.207 alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.61 53.0 4.51e-01 100.0% 64.5%
3637726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.34e-01 100.0% 56.4%
4969210 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.60 51.0 4.54e-01 100.0% 66.3%
3264027 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.65e-01 100.0% 71.1%
5058376 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.50e-01 100.0% 66.3%
3471665 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.59 41.0 4.09e-01 100.0% 70.0%
4941839 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 3.86e-01 100.0% 42.8%
3781035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 51.0 4.54e-01 100.0% 75.5%
4936984 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 3.95e-01 100.0% 53.4%
1296914 213.1.1.26 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_4 0.56 45.0 3.44e-01 90.8% 80.8%
5082698 101.1.2.914 alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.55 41.0 3.67e-01 100.0% 56.7%
2609 101.1.2.38 alpha arrays › HTH › HTH › winged helix domain › RTP 0.55 46.0 3.87e-01 100.0% 53.3%
4423571 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.53 44.0 3.06e-01 95.4% 63.8%
3729138 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.52 38.0 3.41e-01 100.0% 51.4%
4943087 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.52 36.0 3.61e-01 100.0% 70.0%
4112011 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.51 40.0 3.65e-01 100.0% 63.3%
138225 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 36.0 3.45e-01 100.0% 62.7%
3632109 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 36.0 3.21e-01 100.0% 48.2%
4478614 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 36.0 3.37e-01 100.0% 59.1%
3573192 390.1.1.4 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › MANEC 0.50 37.0 3.27e-01 83.1% 68.6%