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OQ622096.1__WGH28565.1__13VV501A_gene0069__00067

Bact-Vir

OQ622096.1__WGH28565.1__13VV501A_gene0069__00067

Identity

Accession:
OQ622096 ↗
Kingdom:
phage

Quality

76.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_13VV501A

TaxID: 3038236

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-63
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1afpA00 2.40.50.60 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Antifungal protein domain 0.54 38.0 3.95e-01 73.7% 98.0%
2levA00 4.10.430.10 Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain 0.53 38.0 3.87e-01 82.5% 77.2%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.53 40.0 3.03e-01 91.2% 35.1%
7zhhA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.50e-01 75.4% 98.5%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.52 31.0 3.38e-01 87.7% 77.5%
3ef2A02 3.30.460.70 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.51 41.0 3.29e-01 100.0% 79.7%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.51 37.0 2.69e-01 87.7% 80.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028836 375.5.1.1 ↗ few secondary structure elements › Rubredoxin-like › NOB1 zinc finger-like › NOB1 zinc finger-like › NOB1_Zn_bind 0.73 54.0 5.23e-01 80.7% 78.5%
5050748 375.1.1.204 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PolC_DP2_central 0.54 42.0 3.62e-01 100.0% 52.0%