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OQ623132.1__WGH50122.1__X__00008

Bact-Vir

OQ623132.1__WGH50122.1__X__00008

Identity

Accession:
OQ623132 ↗
Kingdom:
phage

Quality

77.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Enterococcus_phage_Phi_Eg_SY1

TaxID: 3022905

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-66
PDB
Domain cluster: rep: JQ062992.1__AEV89289.1__phIS3501_025__00024__D8-73
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3w20A00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.75 47.0 3.01e-01 100.0% 13.8%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 61.0 6.12e-01 100.0% 89.1%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.93e-01 100.0% 91.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 58.0 5.57e-01 100.0% 77.4%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.70 61.0 5.19e-01 100.0% 66.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.05e-01 100.0% 68.8%
7w6zA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.63 52.0 4.53e-01 100.0% 91.5%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.63 41.0 4.49e-01 100.0% 95.0%
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.61 38.0 3.86e-01 100.0% 61.4%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 47.0 4.05e-01 100.0% 54.4%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 51.0 4.63e-01 100.0% 82.9%
2veaA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 44.0 3.38e-01 83.6% 60.8%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.36e-01 100.0% 86.8%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.58 46.0 4.67e-01 92.7% 91.1%
3gt2A00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.57 43.0 3.31e-01 100.0% 34.1%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 47.0 4.44e-01 100.0% 84.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.34e-01 100.0% 85.7%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 47.0 4.43e-01 100.0% 91.4%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 47.0 4.54e-01 100.0% 98.4%
3licA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 42.0 3.69e-01 85.5% 79.3%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 40.0 2.79e-01 87.3% 75.6%
1iyjB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 45.0 3.38e-01 94.5% 87.3%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.54 46.0 4.47e-01 100.0% 90.5%
2jmkA00 3.30.420.600 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Thermoplasma acidophilum protein TA0956 0.54 46.0 3.76e-01 100.0% 67.3%
7jsnA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 39.0 2.77e-01 85.5% 61.2%
1p3hB00 2.30.33.40 Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin 0.52 41.0 3.48e-01 90.9% 74.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.51 42.0 3.26e-01 96.4% 75.0%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.51 37.0 3.20e-01 81.8% 87.5%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.51 35.0 2.58e-01 90.9% 26.1%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027750 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 62.0 6.27e-01 100.0% 85.5%
4147528 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.77 66.0 6.17e-01 100.0% 94.3%
4930398 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 65.0 6.10e-01 98.2% 97.1%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.76 58.0 5.50e-01 100.0% 69.2%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.75 56.0 5.67e-01 100.0% 81.8%
4432348 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 57.0 5.30e-01 100.0% 66.2%
5018157 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.74 58.0 5.71e-01 100.0% 80.0%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.67e-01 100.0% 76.6%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 59.0 5.44e-01 100.0% 70.0%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.91e-01 100.0% 89.1%
3712219 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 57.0 5.48e-01 100.0% 75.4%
3971321 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.72 60.0 5.58e-01 100.0% 73.9%
3590658 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 64.0 5.94e-01 100.0% 87.1%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.71 60.0 5.53e-01 100.0% 74.3%
3704305 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.71 59.0 5.51e-01 100.0% 74.3%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 58.0 5.69e-01 100.0% 83.3%
5002601 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.69 52.0 5.10e-01 100.0% 78.0%
4377781 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 61.0 5.39e-01 100.0% 76.2%
4974123 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.69 43.0 3.57e-01 100.0% 35.0%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 54.0 5.02e-01 100.0% 68.6%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 55.0 4.99e-01 100.0% 65.3%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 55.0 5.20e-01 100.0% 75.4%
4979291 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 56.0 5.05e-01 100.0% 66.7%
4214438 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 55.0 5.24e-01 100.0% 76.9%
5022039 11.1.1.1395 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HcyBio 0.68 57.0 4.16e-01 96.4% 61.3%
3954254 4.1.1.387 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.67 56.0 5.34e-01 100.0% 80.0%
4931929 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.67 41.0 3.53e-01 100.0% 37.8%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 57.0 5.18e-01 100.0% 70.7%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 4.67e-01 100.0% 52.7%
4323235 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 58.0 4.62e-01 100.0% 69.1%
3964846 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.65 47.0 4.17e-01 96.4% 51.8%
4930386 11.1.1.1395 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HcyBio 0.65 55.0 4.63e-01 100.0% 96.0%
4991835 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 49.0 5.14e-01 85.5% 100.0%
4018051 2492.1.1.0 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.62 42.0 3.17e-01 70.9% 28.6%
3581513 4357.1.1.1 ↗ beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.61 52.0 4.68e-01 98.2% 81.2%
1734768 4187.1.1.1 ↗ a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB 0.61 38.0 3.80e-01 100.0% 58.6%
4989274 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 37.0 2.78e-01 92.7% 27.1%
3185323 4.1.1.60 ↗ beta barrels › SH3 › SH3 › SH3 › YccV-like 0.53 46.0 3.71e-01 100.0% 50.0%
3487453 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.52 45.0 3.56e-01 100.0% 45.6%
2529893 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.52 45.0 4.18e-01 98.2% 97.1%
3930427 4357.1.1.0 ↗ beta barrels › WWE domain › WWE domain › WWE domain 0.52 39.0 3.80e-01 100.0% 72.3%
4143892 328.6.1.1 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.52 38.0 2.62e-01 81.8% 91.1%
2553270 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.52 43.0 4.05e-01 100.0% 80.8%
2387834 5.4.1.0 ↗ beta duplicates or obligate multimers › beta-propeller-like 0.51 42.0 3.08e-01 92.7% 52.3%
3271216 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 39.0 3.41e-01 89.1% 56.7%