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OQ623150.1__WGL30825.1__Southeast_046__00046
Bact-VirOQ623150.1__WGL30825.1__Southeast_046__00046
Identity
- Accession:
- OQ623150 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-90
Domain cluster:
rep: MK075002.1__AZB66573.1__X__00030__D29-84
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11753.14 best | DUF3310 | 33.5 | 5.00e-08 | 82.5% | 76.7% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.85 | 72.0 | 6.48e-01 | 91.2% | 92.1% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.85 | 68.0 | 6.73e-01 | 86.0% | 86.4% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 66.0 | 5.57e-01 | 84.2% | 57.1% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.83 | 67.0 | 6.12e-01 | 86.0% | 72.6% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.81 | 57.0 | 6.26e-01 | 73.7% | 100.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.81 | 67.0 | 6.53e-01 | 89.5% | 91.8% |
| 2kwhA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.81 | 63.0 | 6.40e-01 | 84.2% | 89.3% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.79 | 62.0 | 5.70e-01 | 86.0% | 82.7% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 62.0 | 5.66e-01 | 89.5% | 86.7% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 69.0 | 5.44e-01 | 100.0% | 53.1% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.76 | 58.0 | 4.35e-01 | 84.2% | 46.8% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.75 | 65.0 | 6.02e-01 | 100.0% | 84.0% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.75 | 65.0 | 5.95e-01 | 100.0% | 80.5% |
| 2jdiH02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.72 | 50.0 | 5.38e-01 | 82.5% | 100.0% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 52.0 | 5.03e-01 | 82.5% | 93.8% |
| 5gmkZ01 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.68 | 57.0 | 3.81e-01 | 94.7% | 65.1% |
| 4myzC00 | 6.10.250.3430 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 44.0 | 4.64e-01 | 77.2% | 74.5% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.68 | 45.0 | 3.70e-01 | 80.7% | 36.0% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 53.0 | 5.27e-01 | 89.5% | 98.3% |
| 5n13A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.67 | 60.0 | 4.85e-01 | 100.0% | 73.1% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 50.0 | 3.85e-01 | 82.5% | 67.9% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.66 | 56.0 | 4.20e-01 | 98.2% | 69.3% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 48.0 | 4.49e-01 | 84.2% | 64.5% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.63 | 50.0 | 4.07e-01 | 91.2% | 59.8% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 54.0 | 4.62e-01 | 100.0% | 67.0% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.61 | 54.0 | 4.90e-01 | 100.0% | 84.6% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 48.0 | 3.30e-01 | 91.2% | 35.6% |
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.58 | 47.0 | 3.70e-01 | 89.5% | 63.6% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 44.0 | 3.00e-01 | 94.7% | 22.2% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 48.0 | 3.03e-01 | 98.2% | 34.9% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 46.0 | 3.42e-01 | 87.7% | 48.9% |
| 4azcA02 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.55 | 38.0 | 3.79e-01 | 75.4% | 71.2% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 36.0 | 2.71e-01 | 80.7% | 81.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969538 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.89 | 73.0 | 7.44e-01 | 86.0% | 96.4% |
| 4944269 | 3456.1.1.0 ↗ | extended segments › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A › NADH-quinone oxidoreductase subunit A | 0.85 | 66.0 | 5.11e-01 | 84.2% | 40.0% |
| 5063166 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 68.0 | 5.46e-01 | 86.0% | 47.6% |
| 3715609 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 75.0 | 7.01e-01 | 100.0% | 84.3% |
| 3671258 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.83 | 66.0 | 4.99e-01 | 86.0% | 37.7% |
| 2720300 | 192.22.1.1 ↗ | alpha bundles › Long alpha-hairpin › Ral binding domain of RLIP76 › Ral binding domain of RLIP76 › RLIP76_Ral-bd | 0.81 | 65.0 | 6.82e-01 | 86.0% | 96.1% |
| 4665988 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.81 | 64.0 | 5.19e-01 | 86.0% | 47.6% |
| 3201381 | 192.8.1.139 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Fung_rhodopsin | 0.81 | 64.0 | 5.83e-01 | 86.0% | 66.7% |
| 3927321 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 73.0 | 6.45e-01 | 100.0% | 76.2% |
| 5070059 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.80 | 62.0 | 3.99e-01 | 84.2% | 20.8% |
| 3725261 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.77 | 61.0 | 3.83e-01 | 86.0% | 18.0% |
| 4816886 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.77 | 57.0 | 5.69e-01 | 80.7% | 81.7% |
| 3242821 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.76 | 56.0 | 5.59e-01 | 84.2% | 76.7% |
| 4948519 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.75 | 67.0 | 6.27e-01 | 100.0% | 84.3% |
| 3673819 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.75 | 65.0 | 5.99e-01 | 100.0% | 74.7% |
| 3601448 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.73 | 67.0 | 4.40e-01 | 100.0% | 30.5% |
| 3386373 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.73 | 56.0 | 5.43e-01 | 86.0% | 76.9% |
| 3163958 | 507.1.1.2 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaG_DnaB_bind | 0.72 | 63.0 | 4.74e-01 | 98.2% | 84.3% |
| 3459724 | 604.1.1.102 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF8324 | 0.69 | 58.0 | 4.77e-01 | 100.0% | 80.0% |
| 3846709 | 109.4.1.2384 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPG48, TPR_AP5Z1 | 0.68 | 55.0 | 3.45e-01 | 94.7% | 18.9% |
| 3491310 | 3826.1.1.67 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med10 | 0.68 | 52.0 | 4.80e-01 | 86.0% | 65.3% |
| 3386596 | 706.1.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › Head domain of nucleotide exchange factor GrpE › GrpE | 0.68 | 50.0 | 5.15e-01 | 84.2% | 94.0% |
| 3591933 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.67 | 51.0 | 3.43e-01 | 86.0% | 20.9% |
| 3705292 | 3444.1.1.0 ↗ | alpha arrays › DP domain › DP domain › DP domain | 0.65 | 46.0 | 4.22e-01 | 75.4% | 82.7% |
| 3418094 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.64 | 53.0 | 4.91e-01 | 100.0% | 76.2% |
| 3839762 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.62 | 49.0 | 4.38e-01 | 89.5% | 92.9% |
| 3676043 | 5076.2.1.10 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 | 0.62 | 53.0 | 3.43e-01 | 100.0% | 100.0% |
| 2464385 | 192.27.1.0 ↗ | alpha bundles › Long alpha-hairpin › Helical hairpin in putative tRNA methyltransferase › Helical hairpin in putative tRNA methyltransferase | 0.61 | 50.0 | 4.88e-01 | 96.5% | 90.5% |
| 3580117 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.56 | 48.0 | 4.40e-01 | 96.5% | 88.0% |