Back to structures

OQ623150.1__WGL30829.1__Southeast_050__00050

Bact-Vir

OQ623150.1__WGL30829.1__Southeast_050__00050

Identity

Accession:
OQ623150 ↗
Kingdom:
phage

Quality

66.8 mean pLDDT

Taxonomy

TaxID: 3034680

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ihmA02 3.30.9.40 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.64 51.0 4.08e-01 88.6% 84.0%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.61 44.0 3.11e-01 78.6% 72.0%
4e6nB00 3.30.1610.20 Alpha Beta › 2-Layer Sandwich › c-terminal autoproteolytic domain of nucleoporin nup98 › Hen1, N-terminal domain 0.60 43.0 3.09e-01 75.7% 66.5%
4oocA00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.59 45.0 3.03e-01 81.4% 82.5%
3klqA01 2.60.40.3050 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 3.72e-01 81.4% 89.1%
3lidA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 40.0 3.65e-01 80.0% 53.1%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.56 41.0 3.52e-01 78.6% 76.7%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.28e-01 71.4% 45.8%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.56 47.0 4.05e-01 95.7% 64.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.39e-01 78.6% 47.3%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 42.0 2.80e-01 82.9% 89.2%
3bcyA00 3.40.1000.40 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Respiratory growth induced protein 1 0.55 40.0 3.16e-01 77.1% 84.2%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 3.75e-01 95.7% 79.0%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.55 44.0 3.26e-01 91.4% 87.8%
4oddA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 39.0 3.17e-01 78.6% 47.0%
4ehoA04 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.36e-01 80.0% 83.9%
1kfiA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.54 44.0 3.77e-01 95.7% 79.2%
5svgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 39.0 3.34e-01 78.6% 64.5%
1e5pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 39.0 3.15e-01 78.6% 47.7%
4gw9A02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 38.0 3.57e-01 77.1% 63.0%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.53 39.0 4.07e-01 77.1% 90.5%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 43.0 3.41e-01 95.7% 67.1%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.53 36.0 2.92e-01 70.0% 63.2%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.41e-01 95.7% 75.9%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.52 37.0 3.86e-01 74.3% 87.3%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 45.0 3.14e-01 100.0% 85.7%
2jdcA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.32e-01 90.0% 99.3%
1h91A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.13e-01 91.4% 81.1%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 43.0 3.13e-01 100.0% 76.2%
5ekaA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.51 37.0 3.50e-01 78.6% 89.4%
8affD01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.51 36.0 3.50e-01 74.3% 94.9%
2hzrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 40.0 3.22e-01 92.9% 85.7%
7t28A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.50 41.0 3.01e-01 100.0% 82.6%
2hn1A01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.50 42.0 3.47e-01 100.0% 50.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3998626 109.4.1.194 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_10 0.65 51.0 2.97e-01 85.7% 17.8%
3323751 244.1.1.9 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C 0.64 43.0 3.60e-01 70.0% 80.8%
3939070 11.1.1.1173 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7757 0.62 54.0 4.47e-01 97.1% 80.8%
3698019 11.8.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.59 49.0 3.86e-01 91.4% 83.4%
5021185 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 45.0 3.36e-01 82.9% 60.0%
3574559 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 49.0 4.05e-01 97.1% 76.2%
3982482 79.1.1.9 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer 0.57 39.0 3.67e-01 72.9% 86.7%
3391728 3459.1.1.1 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › FAIM1 0.56 43.0 4.08e-01 82.9% 79.8%
3589803 2484.1.1.144 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.56 40.0 3.54e-01 74.3% 52.0%
3738504 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.56 45.0 4.00e-01 94.3% 70.0%
4928046 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 40.0 3.38e-01 77.1% 45.8%
3438237 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.54 47.0 3.32e-01 100.0% 73.5%
3770448 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.54 42.0 3.28e-01 88.6% 60.6%
5069442 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.52 43.0 2.98e-01 97.1% 92.8%
3690474 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 43.0 3.19e-01 98.6% 50.9%
3650660 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 35.0 2.93e-01 71.4% 82.8%
5051305 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 47.0 3.84e-01 100.0% 62.4%
3450584 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 35.0 2.32e-01 75.7% 15.6%
3604640 3740.1.1.1 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.51 42.0 3.01e-01 100.0% 80.8%
4666231 9.1.1.14 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.51 37.0 2.74e-01 75.7% 49.7%