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OQ625504.1__WHL30577.1__CrLKS4_g11__00011

Bact-Vir

OQ625504.1__WHL30577.1__CrLKS4_g11__00011

Identity

Accession:
OQ625504 ↗
Kingdom:
phage

Quality

74.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cylindrospermopsis_phage_Cr-LKS4

TaxID: 3046275

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-74
PDB
Domain cluster: representative
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.80 55.0 6.11e-01 77.3% 90.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 51.0 5.89e-01 75.8% 93.8%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.74 49.0 5.35e-01 77.3% 83.3%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.95e-01 75.8% 96.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.34e-01 84.8% 71.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.72e-01 78.8% 94.1%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.73 55.0 4.86e-01 80.3% 85.3%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 53.0 5.85e-01 81.8% 96.3%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 58.0 5.15e-01 86.4% 81.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 54.0 5.09e-01 81.8% 75.9%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 51.0 5.33e-01 78.8% 98.3%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.01e-01 77.3% 89.1%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 4.90e-01 80.3% 90.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 49.0 4.56e-01 78.8% 70.2%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 50.0 4.08e-01 80.3% 50.4%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 4.22e-01 86.4% 68.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.65 47.0 5.22e-01 75.8% 100.0%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 48.0 4.85e-01 78.8% 91.0%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 42.0 3.92e-01 77.3% 51.8%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 43.0 4.71e-01 77.3% 90.0%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 4.75e-01 83.3% 89.6%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 44.0 4.34e-01 74.2% 100.0%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 48.0 4.63e-01 83.3% 88.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.55e-01 81.8% 78.8%
2gs5A01 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.61 50.0 3.69e-01 92.4% 79.8%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 42.0 4.26e-01 75.8% 72.7%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.59 43.0 3.15e-01 78.8% 30.9%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 42.0 4.50e-01 77.3% 98.2%
2lktA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.58 47.0 3.85e-01 90.9% 82.4%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 42.0 3.89e-01 81.8% 74.7%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.52 38.0 3.46e-01 80.3% 95.7%
1o89A01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 37.0 2.98e-01 80.3% 78.4%
1vr5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 35.0 2.75e-01 72.7% 78.2%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 48.0 5.71e-01 72.7% 84.4%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.83 49.0 5.19e-01 77.3% 66.7%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 54.0 4.87e-01 75.8% 54.1%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 52.0 5.70e-01 84.8% 81.8%
3721794 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 57.0 6.01e-01 83.3% 85.0%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 51.0 5.58e-01 84.8% 83.6%
5063537 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.75 47.0 4.93e-01 77.3% 70.0%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 57.0 5.45e-01 80.3% 84.0%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.48e-01 80.3% 85.5%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.38e-01 84.8% 83.6%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 52.0 5.62e-01 78.8% 87.3%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.74 53.0 5.36e-01 80.3% 75.4%
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.74 57.0 6.15e-01 98.5% 98.2%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 50.0 5.44e-01 84.8% 85.5%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.55e-01 84.8% 80.0%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 51.0 5.51e-01 84.8% 87.3%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.59e-01 84.8% 89.1%
3922426 4.1.1.363 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.72 55.0 4.42e-01 80.3% 46.7%
1826911 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 58.0 5.27e-01 86.4% 90.8%
3393319 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 58.0 4.85e-01 93.9% 52.7%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.35e-01 78.8% 87.3%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.37e-01 78.8% 87.3%
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 56.0 5.12e-01 92.4% 65.9%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 48.0 4.88e-01 78.8% 72.3%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 4.95e-01 87.9% 80.0%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 51.0 4.36e-01 78.8% 55.5%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 46.0 4.65e-01 78.8% 69.2%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 4.01e-01 90.9% 37.7%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.36e-01 78.8% 88.3%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.00e-01 83.3% 81.2%
3524130 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.68 55.0 4.59e-01 86.4% 80.0%
4972872 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.68 44.0 5.10e-01 77.3% 97.8%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 49.0 5.19e-01 84.8% 85.0%
158943 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 49.0 4.62e-01 77.3% 72.2%
3576443 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 53.0 5.20e-01 84.8% 97.1%
5036647 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 46.0 4.57e-01 86.4% 68.6%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 5.15e-01 86.4% 90.9%
3404158 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 53.0 4.39e-01 86.4% 76.5%
4099546 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.66 52.0 3.86e-01 86.4% 82.2%
4474739 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.09e-01 86.4% 82.7%
3570230 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 50.0 4.48e-01 83.3% 76.7%
4981036 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 41.0 4.62e-01 75.8% 95.6%
4979962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 44.0 4.43e-01 80.3% 72.3%
4976896 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 47.0 4.16e-01 78.8% 57.9%
3766287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.27e-01 83.3% 72.0%
3964889 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 47.0 4.52e-01 84.8% 73.3%
5075354 4.10.1.0 ↗ beta barrels › SH3 › Fumarylacetoacetate hydrolase, FAH, N-terminal domain › Fumarylacetoacetate hydrolase, FAH, N-terminal domain 0.61 42.0 3.80e-01 72.7% 97.8%
4019085 3270.1.1.1 ↗ a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.61 43.0 3.89e-01 74.2% 92.2%
3396057 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 39.0 3.72e-01 71.2% 55.0%
5029643 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 45.0 4.31e-01 84.8% 68.8%
4961138 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 45.0 4.36e-01 81.8% 73.3%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.60 39.0 3.95e-01 71.2% 67.7%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 46.0 4.33e-01 84.8% 73.8%
3412823 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.58 38.0 4.05e-01 71.2% 80.0%
3409941 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.57 39.0 3.85e-01 71.2% 68.6%
4611577 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 39.0 3.73e-01 72.7% 90.0%
3619225 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 42.0 3.15e-01 81.8% 45.0%
3584246 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 42.0 3.68e-01 81.8% 77.9%
3625149 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.55 41.0 3.93e-01 81.8% 83.7%
3398841 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.55 37.0 3.73e-01 71.2% 68.1%
3389887 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.55 41.0 3.82e-01 81.8% 80.0%
3967770 236.1.1.1 ↗ beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N 0.55 40.0 3.15e-01 81.8% 77.4%
3470353 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.54 33.0 2.69e-01 71.2% 31.2%
3400388 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.53 40.0 4.08e-01 100.0% 83.1%
4000819 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.51 38.0 3.74e-01 98.5% 75.7%