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OQ626344.1__WGL32895.1__JDPAHGNP_00142__00136
Bact-VirOQ626344.1__WGL32895.1__JDPAHGNP_00142__00136
Identity
- Accession:
- OQ626344 ↗
- Kingdom:
- phage
Quality
90.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-54
Domain cluster:
rep: OR067838.1__WLW41300.1__LJIJOHLM_00008__00008__D34-79
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.69 | 52.0 | 3.62e-01 | 81.6% | 50.3% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.68 | 58.0 | 5.21e-01 | 100.0% | 72.2% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 48.0 | 4.05e-01 | 77.6% | 77.6% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 45.0 | 3.42e-01 | 73.5% | 58.3% |
| 4ritA01 | 3.90.1150.170 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.62 | 48.0 | 3.16e-01 | 85.7% | 52.4% |
| 1zfjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 46.0 | 2.72e-01 | 89.8% | 15.5% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.58 | 44.0 | 2.86e-01 | 85.7% | 22.5% |
| 2mkyA00 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.58 | 42.0 | 4.06e-01 | 83.7% | 69.0% |
| 1ka8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 42.0 | 3.38e-01 | 79.6% | 71.0% |
| 3nznA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 41.0 | 3.33e-01 | 81.6% | 45.6% |
| 2qmaA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 41.0 | 3.21e-01 | 85.7% | 72.8% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.55 | 43.0 | 4.00e-01 | 100.0% | 66.7% |
| 1z3eA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 37.0 | 2.85e-01 | 83.7% | 28.6% |
| 2gaxA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.54 | 44.0 | 3.33e-01 | 95.9% | 78.4% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.54 | 45.0 | 3.97e-01 | 100.0% | 74.0% |
| 3m0fA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 38.0 | 3.38e-01 | 79.6% | 49.4% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 46.0 | 4.01e-01 | 98.0% | 81.3% |
| 3oi8A01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 36.0 | 3.15e-01 | 93.9% | 41.8% |
| 3gbyA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 39.0 | 3.09e-01 | 89.8% | 70.1% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.65e-01 | 98.0% | 70.9% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.98e-01 | 100.0% | 87.7% |
| 2zuvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 39.0 | 2.48e-01 | 89.8% | 59.1% |
| 3fveA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 39.0 | 2.95e-01 | 95.9% | 48.7% |
| 6h1wA01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 39.0 | 3.18e-01 | 93.9% | 59.0% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 43.0 | 3.23e-01 | 93.9% | 48.3% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 44.0 | 3.01e-01 | 100.0% | 55.2% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.44e-01 | 98.0% | 59.4% |
| 4ml1A02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 42.0 | 3.22e-01 | 98.0% | 54.3% |
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 43.0 | 3.59e-01 | 98.0% | 67.8% |
| 7xc2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.25e-01 | 93.9% | 60.4% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3760738 | 4357.1.1.9 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE, WWE_3 | 0.72 | 49.0 | 3.49e-01 | 73.5% | 23.5% |
| 3947455 | 206.1.3.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M | 0.69 | 56.0 | 3.77e-01 | 100.0% | 86.0% |
| 4084031 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.66 | 54.0 | 3.52e-01 | 89.8% | 54.1% |
| 3715519 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 46.0 | 3.05e-01 | 73.5% | 21.0% |
| 3780343 | 4357.1.1.4 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_3 | 0.66 | 44.0 | 4.19e-01 | 71.4% | 57.6% |
| 3939304 | 4095.1.1.3 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M | 0.64 | 52.0 | 3.09e-01 | 100.0% | 43.8% |
| 4940035 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 43.0 | 3.39e-01 | 71.4% | 50.9% |
| 3410469 | 304.20.1.3 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D6 | 0.61 | 43.0 | 3.16e-01 | 75.5% | 48.6% |
| 4547498 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 43.0 | 2.76e-01 | 79.6% | 26.8% |
| 3578641 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.60 | 49.0 | 4.42e-01 | 91.8% | 97.1% |
| 2410294 | 284.1.1.1 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C | 0.58 | 36.0 | 3.94e-01 | 73.5% | 75.6% |
| 4284044 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 48.0 | 3.44e-01 | 95.9% | 61.3% |
| 3266199 | 213.1.1.19 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FR47 | 0.57 | 47.0 | 3.33e-01 | 98.0% | 36.6% |
| 3804778 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 43.0 | 3.59e-01 | 87.8% | 83.2% |
| 3624413 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.56 | 45.0 | 4.21e-01 | 91.8% | 76.9% |
| 4599429 | 2485.1.1.16 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ArsC | 0.56 | 38.0 | 2.98e-01 | 81.6% | 29.4% |
| 140048 | 2485.1.1.3 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glutaredoxin | 0.55 | 41.0 | 3.33e-01 | 81.6% | 45.6% |
| 3579956 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.55 | 44.0 | 4.01e-01 | 91.8% | 80.0% |
| 3724934 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 45.0 | 3.10e-01 | 95.9% | 36.3% |
| 3597807 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.54 | 40.0 | 3.10e-01 | 85.7% | 33.1% |
| 4017553 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 38.0 | 3.20e-01 | 77.6% | 42.1% |
| 3312089 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 39.0 | 3.21e-01 | 79.6% | 50.0% |
| 3632622 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.54 | 39.0 | 3.17e-01 | 81.6% | 37.3% |
| 4979807 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.53 | 42.0 | 3.46e-01 | 91.8% | 45.0% |
| 4241517 | 3070.1.1.6 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › TcpQ | 0.53 | 45.0 | 3.89e-01 | 100.0% | 77.5% |
| 5046131 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 45.0 | 3.58e-01 | 98.0% | 63.0% |
| 3430490 | 221.1.1.80 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › KHA | 0.52 | 43.0 | 3.86e-01 | 98.0% | 92.0% |
| 3289282 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.52 | 45.0 | 2.72e-01 | 100.0% | 36.4% |
| 4964736 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.52 | 40.0 | 2.92e-01 | 95.9% | 40.0% |
| 3427121 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 40.0 | 2.79e-01 | 95.9% | 41.9% |
| 4965188 | 101.1.2.943 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26473 | 0.51 | 44.0 | 3.31e-01 | 98.0% | 56.8% |
| 4519937 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.51 | 38.0 | 3.83e-01 | 93.9% | 89.6% |
| 5026926 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.75e-01 | 95.9% | 81.1% |