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OQ627802.1__WFF43744.1__X__00013
Bact-VirOQ627802.1__WFF43744.1__X__00013
Identity
- Accession:
- OQ627802 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
rep: MN830257.1__QHJ75056.1__X__00042__D16-77
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ic8A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 69.0 | 6.22e-01 | 100.0% | 77.7% |
| 3bd1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 53.0 | 5.43e-01 | 78.3% | 78.5% |
| 2jvwA01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.74 | 59.0 | 6.24e-01 | 85.5% | 100.0% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 56.0 | 5.10e-01 | 79.7% | 61.1% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.74 | 55.0 | 5.65e-01 | 81.2% | 81.8% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.74 | 51.0 | 3.96e-01 | 72.5% | 89.3% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.73 | 42.0 | 4.09e-01 | 75.4% | 52.6% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 54.0 | 5.30e-01 | 82.6% | 73.7% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 54.0 | 5.44e-01 | 81.2% | 82.4% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 55.0 | 5.31e-01 | 84.1% | 79.2% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.70 | 52.0 | 5.33e-01 | 82.6% | 84.6% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.66 | 46.0 | 3.65e-01 | 73.9% | 70.7% |
| 3h7iA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.65 | 44.0 | 4.33e-01 | 71.0% | 97.4% |
| 3hyuA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 49.0 | 3.92e-01 | 84.1% | 68.8% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.59 | 49.0 | 4.66e-01 | 94.2% | 78.5% |
| 1dqeA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.58 | 43.0 | 3.54e-01 | 82.6% | 48.9% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.57 | 41.0 | 4.15e-01 | 82.6% | 77.6% |
| 3emuA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 40.0 | 3.12e-01 | 72.5% | 75.0% |
| 1v63A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 47.0 | 4.15e-01 | 97.1% | 62.4% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 40.0 | 3.84e-01 | 75.4% | 76.5% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.56 | 42.0 | 3.60e-01 | 81.2% | 66.4% |
| 3w6zA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 37.0 | 3.10e-01 | 75.4% | 85.1% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.52 | 37.0 | 3.28e-01 | 75.4% | 73.3% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 37.0 | 3.59e-01 | 78.3% | 94.0% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 42.0 | 3.52e-01 | 92.8% | 81.3% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 40.0 | 2.81e-01 | 85.5% | 29.1% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.50 | 29.0 | 2.68e-01 | 76.8% | 43.2% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034109 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.90 | 74.0 | 7.62e-01 | 87.0% | 92.3% |
| 3589834 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.89 | 78.0 | 8.03e-01 | 98.6% | 98.5% |
| 3587013 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.89 | 69.0 | 7.36e-01 | 84.1% | 93.3% |
| 4033750 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.88 | 71.0 | 7.63e-01 | 85.5% | 98.3% |
| 4031257 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.88 | 75.0 | 7.85e-01 | 92.8% | 100.0% |
| 4032484 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.86 | 64.0 | 6.81e-01 | 81.2% | 90.0% |
| 4031147 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.86 | 65.0 | 6.91e-01 | 82.6% | 91.7% |
| 3989197 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.81 | 62.0 | 6.62e-01 | 82.6% | 100.0% |
| 3291176 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.77 | 54.0 | 5.55e-01 | 73.9% | 83.1% |
| 5057414 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.75 | 54.0 | 5.39e-01 | 78.3% | 74.3% |
| 4990518 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.72 | 59.0 | 6.10e-01 | 91.3% | 95.4% |
| 3931465 | 101.1.4.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT | 0.69 | 59.0 | 4.82e-01 | 95.7% | 67.7% |
| 4964308 | 101.1.4.94 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HVO_2718 | 0.68 | 55.0 | 5.63e-01 | 85.5% | 96.9% |
| 3432185 | 101.11.1.2 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Ovate | 0.66 | 39.0 | 4.08e-01 | 81.2% | 61.5% |
| 4430705 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.66 | 51.0 | 3.77e-01 | 84.1% | 35.2% |
| 4994067 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.64 | 48.0 | 4.26e-01 | 81.2% | 66.0% |
| 5047970 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.63 | 53.0 | 3.63e-01 | 95.7% | 94.1% |
| 3510680 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.62 | 43.0 | 4.36e-01 | 100.0% | 71.4% |
| 3573093 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.60 | 42.0 | 3.40e-01 | 73.9% | 77.1% |
| 3944587 | 101.1.4.26 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DNA_meth_N | 0.60 | 46.0 | 4.62e-01 | 91.3% | 87.1% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.58 | 44.0 | 4.23e-01 | 85.5% | 98.8% |
| 3945219 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 48.0 | 4.10e-01 | 91.3% | 66.4% |
| 3291186 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.57 | 50.0 | 4.32e-01 | 95.7% | 82.9% |
| 4968016 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.57 | 48.0 | 4.04e-01 | 92.8% | 62.6% |
| 4095048 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.57 | 51.0 | 4.21e-01 | 98.6% | 71.7% |
| 3599948 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 46.0 | 3.25e-01 | 92.8% | 63.8% |
| 5070510 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.55 | 45.0 | 4.29e-01 | 92.8% | 76.2% |
| 3961538 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.54 | 48.0 | 4.51e-01 | 98.6% | 80.0% |
| 4949658 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.54 | 48.0 | 4.61e-01 | 98.6% | 95.0% |
| 3698039 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 37.0 | 3.09e-01 | 81.2% | 42.6% |
| 3394510 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.51 | 44.0 | 4.20e-01 | 100.0% | 85.0% |