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OQ627803.1__WFD52870.1__X__00019

Bact-Vir

OQ627803.1__WFD52870.1__X__00019

Identity

Accession:
OQ627803 ↗
Kingdom:
phage

Quality

83.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_CR191

TaxID: 3035944

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-97
PDB
Domain cluster: rep: MW476490.1__QRD99559.1__X__00002__D42-111
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 5.64e-01 87.8% 100.0%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 52.0 5.50e-01 98.6% 93.9%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 48.0 4.68e-01 94.6% 70.0%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 5.01e-01 91.9% 90.0%
2e9xD02 3.40.5.60 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.61 44.0 4.83e-01 100.0% 95.0%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.91e-01 97.3% 87.2%
3eqeA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 51.0 4.05e-01 100.0% 55.8%
1k5dB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.66e-01 86.5% 72.6%
1o7fA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.71e-01 97.3% 43.2%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 48.0 3.96e-01 100.0% 60.1%
2fd8A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.53 46.0 3.44e-01 100.0% 65.3%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 45.0 3.60e-01 100.0% 55.3%
1wxaA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 41.0 3.64e-01 90.5% 84.5%
2f4pA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 46.0 3.78e-01 100.0% 79.1%
4nplA00 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.51 45.0 3.30e-01 100.0% 67.6%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 43.0 3.20e-01 95.9% 50.5%
1j1tA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.18e-01 100.0% 89.9%
3d0jA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 43.0 3.62e-01 100.0% 63.8%
4xurA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 43.0 3.46e-01 100.0% 82.0%
3es4A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 41.0 3.57e-01 98.6% 57.8%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2410170 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 53.0 5.71e-01 91.9% 95.2%
4033023 4.1.1.454 ↗ beta barrels › SH3 › SH3 › SH3 › SH3b_T 0.69 60.0 5.80e-01 98.6% 91.8%
5012 4076.3.1.3 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C 0.61 44.0 4.86e-01 100.0% 96.6%
4284041 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.60 52.0 3.85e-01 97.3% 36.4%
3597310 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 47.0 3.97e-01 86.5% 81.5%
3490934 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.58 51.0 4.10e-01 97.3% 49.7%
3475092 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.57 49.0 3.52e-01 97.3% 32.6%
4033331 2.1.1.19 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.56 39.0 4.39e-01 77.0% 98.2%
5063041 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.55 48.0 4.09e-01 100.0% 62.4%
3530890 2004.1.1.402 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT 0.55 48.0 4.55e-01 100.0% 88.6%
4961450 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.55 47.0 3.94e-01 100.0% 55.6%
4634993 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.54 48.0 3.40e-01 100.0% 66.2%
3903397 102.1.1.124 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › CABIT 0.54 46.0 4.57e-01 100.0% 90.0%
3848483 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.54 46.0 4.29e-01 98.6% 79.6%
3230628 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 45.0 3.44e-01 97.3% 41.7%
4030846 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.52 44.0 3.74e-01 100.0% 58.5%
5039058 2.1.1.19 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NfeD 0.52 39.0 4.24e-01 81.1% 98.3%
4027775 2494.1.1.1 ↗ a/b three-layered sandwiches › DTD-like › DTD-like (Pfam 02580) › DTD-like (Pfam 02580) › Tyr_Deacylase 0.51 41.0 3.29e-01 91.9% 92.1%
3597374 7510.1.1.0 ↗ a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like 0.51 31.0 2.44e-01 75.7% 23.9%
D2 high residues 101-163
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ar5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 47.0 3.97e-01 100.0% 81.2%
1wmwB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.55 46.0 3.03e-01 98.4% 38.9%
5f42A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.54 36.0 3.33e-01 100.0% 52.4%
3kk4A01 1.10.3990.20 Mainly Alpha › Orthogonal Bundle › Ribbon-helix-helix fold › protein bp1543 0.54 45.0 3.82e-01 95.2% 58.7%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 44.0 3.59e-01 100.0% 78.5%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 44.0 3.55e-01 100.0% 68.4%
3bbaA00 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.52 41.0 2.92e-01 96.8% 45.1%
4bpxD00 1.20.930.80 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.51 36.0 2.60e-01 77.8% 51.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4158082 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.55 35.0 3.34e-01 95.2% 53.3%
3287995 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.54 47.0 3.78e-01 96.8% 67.5%
3933044 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.53 37.0 2.40e-01 76.2% 92.5%
3970143 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.52 42.0 3.34e-01 92.1% 95.0%
3279218 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.52 45.0 3.54e-01 98.4% 60.7%
3289453 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.52 44.0 3.42e-01 98.4% 57.2%
3974450 10.12.1.8 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding 0.50 43.0 3.34e-01 98.4% 59.3%