←Back to structures

OQ627805.1__WFD52977.1__X__00014

Bact-Vir

OQ627805.1__WFD52977.1__X__00014

Identity

Accession:
OQ627805 ↗
Kingdom:
phage

Quality

85.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_P185

TaxID: 3035947

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-106
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 59.0 6.09e-01 100.0% 85.3%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 53.0 5.78e-01 100.0% 89.5%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 44.0 5.17e-01 100.0% 87.5%
2jxbA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 52.0 4.93e-01 100.0% 60.5%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 52.0 5.47e-01 100.0% 82.8%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 51.0 5.20e-01 100.0% 76.5%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 51.0 5.60e-01 100.0% 93.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 5.35e-01 100.0% 90.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.69 39.0 4.47e-01 100.0% 78.0%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 5.25e-01 100.0% 89.8%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 5.40e-01 100.0% 84.3%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 52.0 5.55e-01 98.6% 96.7%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 49.0 5.05e-01 100.0% 81.8%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.66 52.0 4.63e-01 100.0% 60.8%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 46.0 4.78e-01 100.0% 85.1%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 48.0 4.76e-01 100.0% 85.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 3.96e-01 100.0% 64.3%
1hibA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 43.0 3.46e-01 87.3% 98.0%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.48e-01 94.4% 59.7%
3u97A00 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.52 42.0 4.19e-01 93.0% 88.3%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.51 43.0 3.44e-01 100.0% 89.4%
3fssA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 38.0 3.67e-01 93.0% 69.8%
1ybiA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 39.0 3.30e-01 91.5% 99.3%
1h10A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 42.0 3.63e-01 97.2% 82.9%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4844109 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.78 46.0 4.65e-01 100.0% 59.2%
1545880 4.1.1.278 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd 0.77 59.0 5.72e-01 100.0% 72.5%
3385856 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.75 58.0 6.14e-01 100.0% 92.1%
3396896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.47e-01 100.0% 77.3%
3399912 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 51.0 5.14e-01 100.0% 74.3%
4520767 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.71 55.0 5.60e-01 100.0% 84.3%
4602101 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.71 55.0 5.70e-01 100.0% 89.2%
3840076 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 54.0 5.83e-01 100.0% 98.3%
4358722 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 55.0 4.77e-01 100.0% 56.2%
3791430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 49.0 5.41e-01 98.6% 94.5%
5063004 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.53e-01 100.0% 89.2%
4031670 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 54.0 5.77e-01 98.6% 96.7%
137947 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 54.0 5.59e-01 100.0% 88.1%
137916 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.68 53.0 5.51e-01 100.0% 90.8%
1263586 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.32e-01 100.0% 81.9%
3972820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.39e-01 100.0% 78.8%
4550532 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.68 53.0 4.91e-01 100.0% 66.7%
3928987 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.72e-01 100.0% 67.5%
1263580 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.67 52.0 5.13e-01 100.0% 78.7%
4084890 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 54.0 5.58e-01 100.0% 98.5%
5064571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.33e-01 100.0% 61.1%
4207556 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.64 53.0 5.39e-01 100.0% 92.9%
3706000 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.64 52.0 5.10e-01 100.0% 84.0%
3225816 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.63 50.0 5.04e-01 100.0% 87.1%
3786978 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 51.0 5.20e-01 100.0% 92.8%
3978295 107.1.1.18 ↗ alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › PF29414 0.62 55.0 4.00e-01 100.0% 53.5%
4162968 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 48.0 4.64e-01 100.0% 74.7%
None — 0.62 52.0 3.46e-01 100.0% 22.8%
4007401 4.1.1.393 ↗ beta barrels › SH3 › SH3 › SH3 › PF29414 0.62 54.0 4.69e-01 98.6% 96.4%
4030940 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.60 50.0 3.85e-01 100.0% 41.3%
4517901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.67e-01 100.0% 71.6%
3808601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 54.0 5.08e-01 100.0% 83.5%
3937006 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 49.0 4.78e-01 100.0% 85.9%
4185893 4.1.1.394 ↗ beta barrels › SH3 › SH3 › SH3 › SlpA 0.58 47.0 4.89e-01 100.0% 98.5%
3489469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 51.0 4.46e-01 100.0% 77.1%
4861760 6.1.1.3 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 0.53 42.0 3.46e-01 91.5% 97.2%
3734457 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 42.0 2.92e-01 94.4% 46.3%
3310575 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.51 46.0 4.03e-01 100.0% 70.5%
3743988 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 41.0 3.55e-01 97.2% 76.8%
3393858 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.58e-01 94.4% 87.0%