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OQ627808.1__WFD53203.1__X__00055

Bact-Vir

OQ627808.1__WFD53203.1__X__00055

Identity

Accession:
OQ627808 ↗
Kingdom:
phage

Quality

69.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lactobacillus_phage_T280

TaxID: 3035950

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 39-104
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 53.0 5.08e-01 83.3% 73.4%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 55.0 5.09e-01 84.8% 73.8%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 54.0 5.07e-01 86.4% 72.8%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 51.0 5.18e-01 81.8% 88.9%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 51.0 4.76e-01 83.3% 68.2%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 50.0 4.36e-01 81.8% 55.3%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 4.73e-01 83.3% 78.0%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 5.04e-01 83.3% 89.4%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 5.04e-01 84.8% 81.8%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 49.0 4.73e-01 81.8% 79.2%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 48.0 4.43e-01 83.3% 74.7%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 48.0 4.54e-01 83.3% 78.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 48.0 4.80e-01 83.3% 83.8%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 47.0 4.71e-01 83.3% 81.4%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 47.0 4.61e-01 83.3% 75.0%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 47.0 4.57e-01 83.3% 79.7%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 46.0 4.28e-01 81.8% 63.3%
2jvwA01 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.62 46.0 4.77e-01 80.3% 93.3%
3fmyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 43.0 4.38e-01 80.3% 78.8%
1y7oB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.58 47.0 3.58e-01 95.5% 84.8%
4gm2A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 45.0 3.43e-01 95.5% 94.0%
4boqA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.54 44.0 3.42e-01 100.0% 57.1%
2iaiA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.51 35.0 3.59e-01 71.2% 76.9%
4gewA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.50 32.0 3.10e-01 87.9% 54.5%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022186 101.1.4.58 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF7726 0.75 58.0 6.10e-01 83.3% 98.3%
1923620 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 57.0 5.35e-01 83.3% 72.0%
4994602 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.73 56.0 5.84e-01 81.8% 90.0%
5037780 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.72 56.0 5.30e-01 84.8% 82.5%
3951505 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.71 53.0 5.14e-01 81.8% 74.7%
5054981 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.70 53.0 5.29e-01 83.3% 78.6%
3277922 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.69 53.0 5.10e-01 84.8% 78.7%
1016664 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 52.0 4.62e-01 84.8% 62.6%
2766 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 51.0 5.18e-01 81.8% 88.9%
4155920 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.68 51.0 4.93e-01 81.8% 74.7%
4605318 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 51.0 4.92e-01 83.3% 77.3%
148652 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 50.0 4.63e-01 83.3% 69.7%
3947329 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 51.0 5.19e-01 84.8% 86.2%
3972189 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.67 51.0 4.90e-01 83.3% 77.3%
3972208 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 50.0 4.87e-01 83.3% 77.3%
4055749 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 50.0 4.59e-01 84.8% 64.4%
3965656 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.66 50.0 4.78e-01 84.8% 87.5%
5074725 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.66 49.0 4.99e-01 83.3% 89.2%
3974103 101.1.4.16 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.65 49.0 4.57e-01 83.3% 74.1%
3280189 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 49.0 4.76e-01 83.3% 77.3%
3970175 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 49.0 4.93e-01 83.3% 87.7%
4536849 10.12.1.146 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.65 53.0 3.26e-01 90.9% 20.0%
4159770 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 49.0 4.74e-01 84.8% 77.3%
4942426 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.65 48.0 4.83e-01 80.3% 83.1%
2157747 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.65 48.0 4.82e-01 81.8% 83.6%
3970029 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.64 49.0 4.64e-01 84.8% 87.5%
5057414 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 46.0 4.62e-01 81.8% 75.7%
4967965 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 47.0 4.69e-01 81.8% 78.6%
2775 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 47.0 4.50e-01 83.3% 69.5%
4589522 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 47.0 4.42e-01 81.8% 64.7%
4484890 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 47.0 4.30e-01 81.8% 61.1%
4956880 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.63 47.0 4.71e-01 83.3% 81.4%
184691 130.2.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › PF09905 (DUF2132) › PF09905 (DUF2132) › VF530 0.63 50.0 4.76e-01 90.9% 76.8%
4818340 101.1.1.9 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.63 47.0 4.79e-01 83.3% 90.5%
169605 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.62 46.0 4.37e-01 83.3% 68.2%
3604422 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.61 51.0 5.08e-01 98.5% 91.4%
4945219 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.61 45.0 4.68e-01 81.8% 91.7%
3282040 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.61 46.0 4.28e-01 83.3% 68.2%
4990185 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.61 44.0 4.32e-01 80.3% 73.3%
5015485 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.60 51.0 5.13e-01 98.5% 96.9%
3208271 2004.1.1.24 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C 0.60 46.0 2.67e-01 98.5% 8.5%
3062945 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.59 47.0 4.67e-01 100.0% 85.9%
3982350 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.59 44.0 4.41e-01 84.8% 88.6%
4173793 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.59 43.0 4.15e-01 81.8% 68.8%
3744405 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.51 40.0 3.84e-01 100.0% 73.5%
3256858 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.50 38.0 3.59e-01 81.8% 97.5%