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OQ628262.1__WFZ78516.1__MQM1_033__00033

Bact-Vir

OQ628262.1__WFZ78516.1__MQM1_033__00033

Identity

Accession:
OQ628262 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_vB_AsaP_MQM1

TaxID: 3038230

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2y8nB01 2.20.70.100 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.58 40.0 4.26e-01 85.7% 85.7%
2b2tB02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 39.0 3.48e-01 89.8% 52.6%
2cs3A01 1.10.10.1580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Interferon regulatory factor 2-binding protein 0.50 32.0 3.10e-01 81.6% 54.2%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3465532 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 41.0 3.63e-01 73.5% 82.9%
4178455 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.58 46.0 3.01e-01 100.0% 31.6%
4249852 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.56 45.0 2.95e-01 100.0% 32.7%
3168819 4076.3.1.3 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › SLD5_C 0.54 44.0 3.96e-01 95.9% 78.4%
3826378 376.1.6.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR 0.54 35.0 3.07e-01 81.6% 42.7%
3935116 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.53 37.0 3.39e-01 79.6% 55.4%
None — 0.53 43.0 2.81e-01 100.0% 32.6%
3465998 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.53 42.0 2.66e-01 91.8% 22.8%
3555043 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.51 35.0 3.15e-01 79.6% 48.0%