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OQ628262.1__WFZ78535.1__MQM1_053__00053

Bact-Vir

OQ628262.1__WFZ78535.1__MQM1_053__00053

Identity

Accession:
OQ628262 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aeromonas_phage_vB_AsaP_MQM1

TaxID: 3038230

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-71
PDB
Domain cluster: rep: NC_042067.1__YP_009618328.1__FDI95_gp191__00269__D2-73
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.72 32.0 4.40e-01 98.6% 87.9%
2kxqA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.71 32.0 4.32e-01 100.0% 96.7%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 40.0 4.02e-01 100.0% 62.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.30e-01 98.6% 78.0%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 37.0 4.22e-01 95.7% 87.5%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 39.0 3.65e-01 100.0% 51.6%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 37.0 3.73e-01 100.0% 61.6%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 40.0 4.04e-01 81.4% 71.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.35e-01 100.0% 81.9%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 37.0 3.95e-01 94.3% 78.7%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.56 39.0 3.41e-01 74.3% 92.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 3.67e-01 100.0% 69.7%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 34.0 3.55e-01 95.7% 67.2%
2i2lA01 2.10.70.50 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.54 36.0 3.96e-01 98.6% 92.3%
5amhA00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.54 44.0 3.93e-01 92.9% 95.3%
1h3zA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.21e-01 70.0% 81.5%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 38.0 3.37e-01 75.7% 91.9%
2v90C00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 42.0 3.86e-01 88.6% 73.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 4.13e-01 95.7% 81.0%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.51 30.0 3.51e-01 70.0% 85.4%
1dwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 39.0 2.77e-01 90.0% 87.0%
3le4A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.50 33.0 3.66e-01 100.0% 87.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407089 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 39.0 3.81e-01 100.0% 55.0%
3942078 4212.1.1.1 ↗ beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PapC_N 0.61 53.0 4.52e-01 100.0% 65.0%
4459065 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 35.0 3.33e-01 100.0% 46.7%
3836094 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.56 39.0 3.32e-01 74.3% 91.2%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.55 39.0 3.98e-01 100.0% 77.1%
3975885 7523.1.1.23 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 0.54 38.0 3.16e-01 74.3% 46.7%
5042140 278.1.1.1 ↗ a+b complex topology › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › FAD_binding_2 0.54 43.0 3.56e-01 90.0% 84.4%
4993154 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.54 39.0 3.29e-01 84.3% 43.0%
3936039 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 39.0 2.86e-01 81.4% 78.7%
396031 4.22.1.1 ↗ beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom 0.53 34.0 3.12e-01 100.0% 44.6%
3324925 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.52 35.0 3.57e-01 94.3% 73.8%
3496964 1.1.1.0 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease 0.52 38.0 3.22e-01 85.7% 44.8%
3287567 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.52 42.0 3.93e-01 91.4% 76.7%
3926416 1.1.1.19 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD 0.52 35.0 3.07e-01 82.9% 44.5%
4991644 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.52 35.0 2.98e-01 72.9% 66.2%
4939072 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.51 36.0 2.96e-01 75.7% 86.2%
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.51 35.0 3.31e-01 98.6% 55.6%
3907533 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.51 29.0 3.33e-01 92.9% 87.5%
5053627 601.23.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.51 39.0 2.61e-01 97.1% 19.7%
3417872 1.1.11.1 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 0.51 35.0 3.21e-01 74.3% 92.4%
3339179 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.50 34.0 3.15e-01 98.6% 51.6%
3726946 708.1.2.6 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA 0.50 36.0 3.06e-01 85.7% 46.1%