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OQ632216.1__WGL32453.1__Arash_gp2__00002

Bact-Vir

OQ632216.1__WGL32453.1__Arash_gp2__00002

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

79.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_Arash

TaxID: 3038319

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-183
PDB
Domain cluster: rep: GWB1_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00487__D19-147
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.72 60.0 5.96e-01 93.3% 86.0%
3eucA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 32.0 2.89e-01 85.7% 35.0%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.59 31.0 3.38e-01 96.2% 59.3%
4uyaA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 43.0 3.54e-01 78.1% 77.7%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 32.0 3.81e-01 91.4% 85.3%
1fafA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.54 34.0 3.88e-01 94.3% 84.8%
4g6dB02 6.10.140.1800 Special › Helix non-globular › Helix Hairpins › 0.54 36.0 4.07e-01 99.0% 90.1%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.52 39.0 3.80e-01 78.1% 87.0%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586672 6050.1.1.0 ↗ a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone 0.77 63.0 6.39e-01 96.2% 87.6%
3413026 103.4.1.3 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_N 0.70 36.0 4.32e-01 84.8% 74.3%
4954554 6050.1.1.0 ↗ a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone 0.69 56.0 5.63e-01 93.3% 85.7%
3944499 6050.1.1.0 ↗ a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone 0.61 46.0 4.98e-01 94.3% 98.8%
4537543 3103.1.1.4 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 0.58 51.0 4.87e-01 97.1% 98.4%
5066723 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.57 36.0 3.77e-01 100.0% 69.5%
4447560 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.57 40.0 4.06e-01 92.4% 74.3%
4559880 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.57 43.0 4.46e-01 89.5% 88.4%
4290251 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.55 42.0 4.35e-01 89.5% 88.4%
4340919 306.7.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain 0.55 41.0 4.25e-01 89.5% 87.4%
4384275 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.54 38.0 3.31e-01 72.4% 100.0%
4190969 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.54 44.0 4.20e-01 89.5% 85.6%
4962807 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 26.0 3.22e-01 86.7% 73.8%
4371213 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.53 41.0 4.20e-01 90.5% 87.0%
4502274 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.53 40.0 4.21e-01 90.5% 89.5%
4347463 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.52 43.0 4.20e-01 89.5% 91.3%
4525468 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.52 43.0 4.27e-01 90.5% 93.6%
3789158 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.51 36.0 2.79e-01 73.3% 85.7%
3295074 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.50 41.0 3.79e-01 90.5% 95.0%
5053211 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.50 36.0 3.17e-01 75.2% 96.2%
4599972 306.7.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain 0.50 41.0 4.06e-01 90.5% 91.3%