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OQ632216.1__WGL32499.1__Arash_gp48c__00048

Bact-Vir

OQ632216.1__WGL32499.1__Arash_gp48c__00048

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

96.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_Arash

TaxID: 3038319

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-110
PDB
Domain cluster: rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303631__D8-117
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10547.15 best P22_AR_N 34.7 2.50e-08 93.6% 77.4%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.76e-01 92.7% 60.5%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 34.0 3.58e-01 76.1% 64.7%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 33.0 3.48e-01 74.3% 65.3%
4pk9A00 3.40.1090.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain 0.55 43.0 3.04e-01 85.3% 81.1%
1dq3A04 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 40.0 4.03e-01 97.2% 75.4%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.54 36.0 4.03e-01 84.4% 90.2%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.89e-01 87.2% 82.4%
1y8tA03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 28.0 3.04e-01 97.2% 60.2%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.77e-01 87.2% 77.7%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 42.0 4.04e-01 97.2% 77.3%
3eucA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 38.0 3.17e-01 80.7% 92.8%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944712 101.1.9.40 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › P22_AR_N 0.79 68.0 6.93e-01 94.5% 95.2%
3968916 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.79 65.0 6.62e-01 100.0% 90.5%
3505855 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 52.0 5.97e-01 73.4% 100.0%
3984393 101.1.9.88 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.70 57.0 5.76e-01 94.5% 86.4%
3947416 101.1.9.88 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.63 55.0 5.51e-01 98.2% 96.4%
3506247 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 42.0 3.49e-01 73.4% 39.0%
5029743 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 36.0 3.81e-01 78.0% 67.4%
4979815 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.58 34.0 3.73e-01 78.0% 70.0%
5028314 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 40.0 4.09e-01 94.5% 75.2%
5011620 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 36.0 3.86e-01 90.8% 75.6%
3486523 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.57 35.0 3.74e-01 80.7% 72.2%
5066984 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.55 34.0 3.88e-01 89.9% 85.0%
5060792 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 37.0 3.62e-01 73.4% 62.1%
5012702 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.54 41.0 4.11e-01 90.8% 78.3%
5078552 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.54 39.0 3.36e-01 89.9% 47.4%
4955412 316.1.1.18 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.53 39.0 3.43e-01 80.7% 66.5%
3178012 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.52 38.0 3.86e-01 93.6% 79.0%
4230863 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 38.0 3.87e-01 95.4% 79.1%
154263 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 3.77e-01 87.2% 77.7%
5082386 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 3.49e-01 73.4% 63.7%
5051534 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 2.99e-01 72.5% 60.0%
3285382 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 3.64e-01 72.5% 73.6%
3512046 862.1.1.0 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.51 41.0 3.15e-01 88.1% 70.6%
5050259 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 3.05e-01 74.3% 70.3%
4995124 882.1.1.4 ↗ a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.51 37.0 3.44e-01 77.1% 83.6%
3705622 2008.1.1.118 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RHSP 0.50 41.0 2.96e-01 88.1% 67.0%
5010819 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.30e-01 96.3% 55.3%