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OQ632216.1__WGL32558.1__Arash_gp107c__00107

Bact-Vir

OQ632216.1__WGL32558.1__Arash_gp107c__00107

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-67
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.02e-01 98.5% 72.3%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.50e-01 92.3% 72.6%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.41e-01 90.8% 72.0%
1ig8A03 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.69 59.0 3.95e-01 100.0% 29.7%
1ci4A00 1.10.150.40 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF 0.67 56.0 5.12e-01 93.8% 86.4%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.67 48.0 4.04e-01 76.9% 45.0%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.67 57.0 5.10e-01 100.0% 69.1%
2hzdA00 6.10.20.40 Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain 0.66 52.0 4.84e-01 86.2% 89.0%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.66 57.0 5.26e-01 100.0% 89.5%
2l7kA00 1.10.10.1850 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sporulation protein-like 0.64 45.0 4.30e-01 73.8% 84.2%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 53.0 4.24e-01 100.0% 62.9%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 50.0 5.00e-01 100.0% 87.0%
3fmcC01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.62 43.0 2.84e-01 72.3% 42.8%
2b4lA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.61 47.0 3.62e-01 86.2% 81.5%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.61 50.0 4.78e-01 100.0% 92.6%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.32e-01 100.0% 73.4%
4a18Q01 1.10.10.1760 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 0.60 51.0 5.06e-01 95.4% 88.4%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.60 36.0 3.35e-01 100.0% 48.8%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.59 45.0 4.00e-01 81.5% 67.0%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 50.0 4.88e-01 100.0% 94.6%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 39.0 3.97e-01 100.0% 71.0%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 46.0 4.63e-01 90.8% 100.0%
4jb3A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 49.0 4.82e-01 100.0% 95.8%
3tzeA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.58 40.0 3.43e-01 72.3% 78.7%
3zlaD01 1.20.142.20 Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › 0.58 44.0 3.63e-01 84.6% 81.0%
1h99A01 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.58 50.0 4.32e-01 98.5% 73.1%
2bkkC02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.58 47.0 3.54e-01 93.8% 76.3%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 51.0 4.83e-01 100.0% 94.9%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 51.0 4.74e-01 100.0% 95.1%
2yi9A05 1.20.1270.270 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain 0.57 33.0 3.12e-01 100.0% 46.8%
1t0fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.82e-01 86.2% 75.8%
4q6bA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 46.0 3.43e-01 100.0% 84.1%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 48.0 3.85e-01 100.0% 75.0%
1sxjD03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.55 40.0 3.64e-01 78.5% 56.0%
1dgnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 46.0 4.16e-01 98.5% 68.5%
3eoqB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.55 46.0 3.41e-01 98.5% 82.5%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 41.0 4.25e-01 87.7% 93.3%
4rv5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 44.0 3.27e-01 100.0% 86.1%
2h21B01 3.90.1410.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 1 › set domain protein methyltransferase, domain 1 0.54 47.0 3.20e-01 100.0% 53.3%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 47.0 4.55e-01 100.0% 86.7%
4xsgB00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.53 40.0 2.85e-01 81.5% 75.1%
1q44A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 45.0 2.98e-01 96.9% 62.3%
2riqA01 1.10.20.130 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › 0.53 34.0 3.45e-01 86.2% 65.2%
3kp9A01 1.20.1440.130 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › VKOR domain 0.53 44.0 3.38e-01 96.9% 77.2%
2c5iT00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 39.0 3.43e-01 80.0% 87.2%
1h99A02 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.52 44.0 3.80e-01 98.5% 75.5%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 43.0 4.11e-01 100.0% 88.5%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.50 39.0 3.53e-01 90.8% 88.9%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723123 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 64.0 6.66e-01 73.8% 83.3%
4655717 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.88 69.0 6.61e-01 84.6% 84.0%
5049604 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 63.0 6.77e-01 76.9% 94.5%
3617137 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 63.0 6.78e-01 76.9% 100.0%
5053360 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 6.55e-01 93.8% 69.4%
4926838 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.84 71.0 7.14e-01 98.5% 90.8%
3620979 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 60.0 6.50e-01 75.4% 98.2%
3960420 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 76.0 6.05e-01 100.0% 99.2%
4959187 101.1.2.489 alpha arrays › HTH › HTH › winged helix domain › Transposase_mut 0.83 58.0 6.50e-01 73.8% 100.0%
5052263 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 75.0 7.15e-01 98.5% 94.7%
3933926 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 63.0 6.32e-01 80.0% 84.6%
4927588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 70.0 6.67e-01 98.5% 80.0%
5047162 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 58.0 5.86e-01 73.8% 76.9%
3730451 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 75.0 6.96e-01 98.5% 90.0%
3198858 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 62.0 6.07e-01 80.0% 80.0%
4014657 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 59.0 6.35e-01 75.4% 100.0%
3689691 101.1.10.61 alpha arrays › HTH › HTH › Cyclin-like › Clr5 0.80 71.0 6.54e-01 100.0% 92.9%
3958041 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 5.83e-01 76.9% 78.5%
3428283 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 59.0 6.13e-01 80.0% 91.7%
3505644 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.78 72.0 7.21e-01 100.0% 100.0%
4958195 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 6.18e-01 80.0% 100.0%
3203378 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 59.0 5.91e-01 80.0% 84.6%
5083383 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 61.0 6.35e-01 92.3% 90.0%
4274627 101.1.1.266 alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut 0.77 63.0 6.52e-01 92.3% 95.0%
3636036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 6.28e-01 92.3% 90.0%
5003693 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 58.0 5.84e-01 80.0% 86.2%
4027348 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.77 68.0 6.50e-01 100.0% 92.0%
5007660 101.1.1.187 alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 0.76 57.0 5.74e-01 80.0% 86.2%
3901880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 5.74e-01 80.0% 81.5%
3406651 592.7.1.1 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.76 65.0 6.25e-01 96.9% 89.3%
5070167 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 55.0 5.92e-01 76.9% 90.9%
3342850 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.75 64.0 6.20e-01 96.9% 89.3%
3334149 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 55.0 5.86e-01 78.5% 100.0%
3784553 592.1.1.6 alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 0.74 67.0 6.15e-01 100.0% 85.9%
3266110 592.7.1.0 alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain 0.74 65.0 6.12e-01 100.0% 86.3%
5006610 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 55.0 5.69e-01 78.5% 86.7%
3958858 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.73 66.0 5.25e-01 100.0% 96.2%
3814136 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 5.81e-01 80.0% 100.0%
3618803 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 51.0 5.33e-01 73.8% 83.3%
3987909 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.72 60.0 4.65e-01 89.2% 97.0%
3960055 592.1.1.14 alpha arrays › PWI domain-like › PWI domain › PWI domain › Transposase_mut 0.72 65.0 5.15e-01 100.0% 95.4%
3603105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 64.0 6.15e-01 100.0% 86.7%
3422646 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 54.0 5.57e-01 80.0% 93.3%
3450729 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 52.0 5.11e-01 78.5% 87.1%
4014593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.88e-01 87.7% 100.0%
4237263 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.71 63.0 5.16e-01 100.0% 59.2%
3467989 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 55.0 5.67e-01 83.1% 96.7%
3455407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 53.0 5.65e-01 80.0% 100.0%
3454767 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 53.0 5.63e-01 80.0% 100.0%
3786647 592.6.1.1 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.70 60.0 5.66e-01 100.0% 93.8%
5055517 4953.1.1.0 beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.69 61.0 4.79e-01 100.0% 73.6%
3366917 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.68 53.0 5.65e-01 87.7% 100.0%
5053119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 4.77e-01 95.4% 71.7%
3624059 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.67 50.0 4.33e-01 81.5% 54.3%
4978899 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 53.0 4.94e-01 87.7% 97.5%
4956137 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.22e-01 100.0% 91.1%
3417440 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.63 55.0 4.35e-01 98.5% 89.6%
4271175 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.59 46.0 3.73e-01 89.2% 51.9%
4075945 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.58 46.0 3.71e-01 93.8% 51.0%
4959879 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.57 47.0 3.37e-01 100.0% 28.4%
3590779 162.1.1.1 alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.57 48.0 4.00e-01 98.5% 61.7%
3588021 162.1.1.1 alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.55 47.0 4.16e-01 100.0% 78.0%
3590616 162.1.1.1 alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.53 45.0 3.96e-01 98.5% 79.0%
3663404 192.4.1.16 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Exo70_C 0.53 40.0 3.87e-01 81.5% 90.7%
5028556 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.52 43.0 3.09e-01 100.0% 28.5%