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OQ632216.1__WGL32586.1__Arash_gp135c__00135

Bact-Vir

OQ632216.1__WGL32586.1__Arash_gp135c__00135

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_Arash

TaxID: 3038319

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: rep: NC_068555.1__YP_010563461.1__OXC43_gp83__00036__D4-61
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 6.07e-01 100.0% 93.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.87e-01 100.0% 89.4%
2zo4A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.72 55.0 3.46e-01 83.7% 36.9%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.90e-01 100.0% 95.2%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 61.0 5.09e-01 98.0% 67.5%
1sf9A02 2.30.30.340 Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains 0.69 60.0 5.91e-01 100.0% 96.3%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.36e-01 100.0% 87.0%
3r2uB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.66 50.0 3.21e-01 83.7% 27.0%
1e5dA02 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.66 49.0 3.17e-01 83.7% 25.9%
7razA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 56.0 4.76e-01 100.0% 67.1%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 4.95e-01 100.0% 86.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.85e-01 100.0% 86.7%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 50.0 3.82e-01 89.8% 49.6%
4owkE00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.63 43.0 3.17e-01 71.4% 50.7%
2gcuA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 50.0 3.24e-01 89.8% 64.1%
5wcmA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 47.0 2.98e-01 83.7% 30.4%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.62 52.0 4.37e-01 100.0% 76.3%
4amcA01 2.30.30.20 Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain 0.62 43.0 4.41e-01 73.5% 82.6%
2qggA02 2.30.30.240 Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain 0.61 49.0 4.33e-01 100.0% 86.7%
4cp6A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.60 47.0 2.76e-01 85.7% 14.1%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 51.0 4.15e-01 100.0% 53.3%
1kafA00 3.90.1150.20 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain 0.56 46.0 3.71e-01 100.0% 88.9%
3gjyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 41.0 2.65e-01 87.8% 40.1%
3fogA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 37.0 2.99e-01 73.5% 98.0%
4divS02 2.60.120.860 Mainly Beta › Sandwich › Jelly Rolls › 0.52 41.0 3.41e-01 95.9% 83.7%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 39.0 3.33e-01 89.8% 93.4%
3dnsA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 37.0 2.92e-01 87.8% 55.0%
5g5tA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.50 34.0 2.38e-01 73.5% 36.3%
1noyA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.50 34.0 2.62e-01 73.5% 86.6%
ECOD (65)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 6.61e-01 93.9% 97.8%
5040416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.52e-01 95.9% 98.0%
5017214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.32e-01 95.9% 90.9%
3486330 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 6.68e-01 98.0% 96.0%
3603357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.41e-01 98.0% 94.5%
4992872 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.40e-01 98.0% 94.5%
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 6.12e-01 95.9% 89.1%
4946165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.20e-01 98.0% 90.9%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 66.0 6.03e-01 100.0% 90.8%
5033075 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.19e-01 98.0% 90.9%
4213539 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 64.0 5.90e-01 100.0% 90.8%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 63.0 5.83e-01 100.0% 93.8%
4077367 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 63.0 5.83e-01 100.0% 93.8%
4990212 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 6.01e-01 95.9% 90.9%
4947995 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 5.99e-01 98.0% 90.9%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.73 62.0 5.66e-01 95.9% 86.2%
4146937 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 62.0 5.74e-01 100.0% 90.8%
4038269 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 65.0 5.90e-01 100.0% 92.3%
4369736 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.72 57.0 5.88e-01 93.9% 93.3%
4419948 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 62.0 5.74e-01 100.0% 90.8%
4938404 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 60.0 5.80e-01 98.0% 83.6%
4010317 4.1.1.395 ↗ beta barrels › SH3 › SH3 › SH3 › PF27398 0.72 62.0 5.64e-01 100.0% 72.3%
5058671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.94e-01 98.0% 89.1%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 62.0 5.70e-01 100.0% 90.8%
5056706 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 6.05e-01 98.0% 96.0%
3214131 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.15e-01 95.9% 65.0%
3961546 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 62.0 5.65e-01 100.0% 87.7%
5060760 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 61.0 5.61e-01 100.0% 89.2%
5042477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 6.03e-01 95.9% 100.0%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.84e-01 89.8% 100.0%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.78e-01 98.0% 85.5%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.70e-01 98.0% 85.5%
5054668 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.42e-01 98.0% 93.3%
5075805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.51e-01 95.9% 89.1%
5025079 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.69e-01 100.0% 94.5%
5063537 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 55.0 5.25e-01 100.0% 83.3%
3289363 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.67 50.0 4.64e-01 100.0% 65.0%
5011920 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 55.0 4.72e-01 95.9% 97.5%
3638043 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 53.0 3.31e-01 91.8% 25.4%
3230533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.67e-01 98.0% 100.0%
4956032 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.65 47.0 4.36e-01 100.0% 61.7%
5044373 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.19e-01 100.0% 88.3%
3507373 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.65 47.0 4.09e-01 77.6% 88.0%
4182977 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.65 51.0 4.93e-01 100.0% 78.3%
4995901 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.22e-01 98.0% 87.3%
3513422 391.1.1.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 45.0 4.28e-01 77.6% 96.7%
3518895 391.1.2.9 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › Fn1_2 0.62 45.0 3.62e-01 77.6% 67.0%
4007999 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 51.0 3.80e-01 95.9% 40.0%
3224319 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.62 45.0 4.07e-01 79.6% 91.4%
3960335 239.1.1.0 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.62 49.0 4.34e-01 98.0% 60.0%
5083031 247.1.1.30 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 0.61 47.0 3.03e-01 83.7% 35.4%
5034740 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.61 45.0 2.91e-01 81.6% 31.4%
5008689 247.1.1.28 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL 0.60 45.0 3.09e-01 83.7% 31.6%
4854958 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 52.0 4.15e-01 100.0% 50.0%
1685099 1.1.7.51 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NeqB_N 0.59 47.0 4.50e-01 100.0% 74.6%
5015084 239.1.1.7 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Lhr_WH 0.59 42.0 3.98e-01 100.0% 63.3%
5056317 247.1.1.11 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.59 44.0 2.83e-01 83.7% 24.8%
3994608 2007.2.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 45.0 3.04e-01 89.8% 23.3%
3945508 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.58 46.0 3.14e-01 93.9% 96.0%
3282992 391.1.2.0 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.56 47.0 3.71e-01 95.9% 55.6%
2521280 241.5.1.1 ↗ a+b two layers › Type III secretory system chaperone-like › DNA-binding C-terminal domain of the transcription factor MotA › DNA-binding C-terminal domain of the transcription factor MotA › MotCF 0.55 43.0 3.52e-01 98.0% 81.7%
4316228 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.55 39.0 3.11e-01 75.5% 56.2%
4001842 10.32.1.1 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B 0.54 46.0 3.24e-01 100.0% 48.0%
5064404 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 44.0 4.16e-01 100.0% 81.7%
4999679 267.1.1.3 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.51 41.0 2.75e-01 95.9% 97.7%