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OQ632216.1__WGL32599.1__Arash_gp148c__00148

Bact-Vir

OQ632216.1__WGL32599.1__Arash_gp148c__00148

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

71.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Salmonella_phage_Arash

TaxID: 3038319

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vk9A03 1.10.3730.30 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › 0.77 58.0 5.74e-01 77.7% 90.8%
6srbA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 35.0 3.36e-01 75.5% 53.2%
1z82B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.55 43.0 3.80e-01 83.0% 84.8%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 39.0 4.16e-01 96.8% 85.5%
2pbiA02 1.10.1240.60 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.54 36.0 3.62e-01 97.9% 65.3%
2dbdA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.54 36.0 3.51e-01 81.9% 60.7%
4yt3A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 41.0 2.75e-01 84.0% 74.2%
4tpoA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 41.0 2.73e-01 84.0% 71.6%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.52 44.0 3.75e-01 91.5% 94.1%
2r7hB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 40.0 3.39e-01 98.9% 50.9%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740646 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.70 47.0 5.07e-01 91.5% 81.2%
3504408 6132.1.1.1 ↗ alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix_N 0.67 36.0 4.40e-01 83.0% 81.7%
4959600 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 49.0 5.09e-01 93.6% 84.7%
4288336 6132.1.1.1 ↗ alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix_N 0.66 37.0 4.33e-01 83.0% 78.5%
3328865 3788.1.1.0 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) 0.66 47.0 5.33e-01 93.6% 100.0%
3538243 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.65 44.0 4.72e-01 91.5% 81.2%
3287733 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 46.0 5.06e-01 96.8% 93.3%
3465214 103.4.1.5 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 0.65 45.0 4.84e-01 92.6% 85.0%
3174828 103.4.1.15 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28865 0.63 43.0 4.55e-01 95.7% 81.2%
4456395 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.62 47.0 3.34e-01 96.8% 26.2%
4944324 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.57 41.0 3.04e-01 74.5% 54.2%
5014028 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.56 41.0 3.15e-01 77.7% 49.1%
4025752 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 46.0 3.13e-01 88.3% 30.9%
3357142 610.3.1.0 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.56 33.0 3.83e-01 100.0% 84.4%
3685640 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.55 46.0 4.87e-01 97.9% 100.0%
3457593 1128.1.1.1 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR 0.55 46.0 4.53e-01 98.9% 85.0%
2075049 3787.1.1.0 ↗ alpha bundles › HAD superfamily helical bundle insertion domain 0.55 39.0 4.07e-01 93.6% 80.2%
3567610 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 38.0 2.55e-01 74.5% 44.3%
3971697 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 45.0 3.64e-01 100.0% 80.0%
3731469 171.1.1.1 ↗ alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 0.52 45.0 3.46e-01 98.9% 62.2%
5079622 2005.1.1.4 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Asn_synthase 0.50 36.0 2.59e-01 74.5% 82.8%