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OQ632216.1__WGL32613.1__Arash_gp162c__00162

Bact-Vir

OQ632216.1__WGL32613.1__Arash_gp162c__00162

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-82
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.76 54.0 5.74e-01 75.6% 86.3%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.74 55.0 5.93e-01 78.0% 100.0%
2fphX01 3.30.1370.160 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.74 57.0 5.89e-01 81.7% 87.0%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.71 51.0 5.46e-01 76.8% 88.6%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.71 48.0 4.96e-01 70.7% 76.9%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.70 48.0 3.58e-01 72.0% 29.2%
7m0oA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.70 47.0 3.64e-01 74.4% 31.5%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.67 47.0 4.83e-01 75.6% 77.2%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.67 49.0 3.32e-01 79.3% 83.8%
2h7oA02 1.20.58.1230 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Rac1-binding domain, C-terminal subdomain 0.67 60.0 4.92e-01 98.8% 85.0%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.79e-01 79.3% 100.0%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 50.0 3.94e-01 82.9% 40.5%
2o0bA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.64 48.0 3.54e-01 80.5% 95.3%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.64 44.0 4.03e-01 72.0% 87.2%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.61 43.0 4.26e-01 73.2% 81.6%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 42.0 3.69e-01 70.7% 91.9%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.61 43.0 3.40e-01 73.2% 40.4%
3euhD01 1.10.10.2250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.61 46.0 4.91e-01 81.7% 95.7%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 43.0 3.96e-01 73.2% 84.1%
2j0nB00 1.20.1710.10 Mainly Alpha › Up-down Bundle › IpaD-like › IpaD-like 0.61 55.0 4.21e-01 100.0% 71.1%
4dw8A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.61 43.0 3.97e-01 74.4% 86.8%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.59 43.0 4.11e-01 75.6% 80.9%
2cxaA01 3.30.70.3550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Leucyl/phenylalanyl-tRNA-protein transferase, N-terminal domain 0.59 38.0 4.21e-01 78.0% 90.0%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 49.0 3.63e-01 95.1% 54.7%
1xqaA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 40.0 3.64e-01 72.0% 73.6%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.46e-01 80.5% 93.3%
3ehgA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 39.0 3.46e-01 74.4% 70.4%
3cuqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 4.22e-01 82.9% 100.0%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.55 43.0 3.82e-01 86.6% 85.4%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 4.22e-01 86.6% 82.9%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.51e-01 80.5% 55.5%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.45e-01 76.8% 53.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.84e-01 78.0% 74.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.79e-01 78.0% 73.9%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.92e-01 81.7% 73.1%
1wzcA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.53 38.0 3.80e-01 74.4% 85.5%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.79e-01 76.8% 77.6%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 41.0 3.70e-01 87.8% 75.0%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 4.13e-01 80.5% 95.7%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.51e-01 76.8% 63.4%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.80e-01 79.3% 79.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.80e-01 80.5% 80.8%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.93e-01 76.8% 96.9%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3266992 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.81 57.0 6.38e-01 73.2% 100.0%
3781365 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.81 59.0 6.14e-01 75.6% 88.0%
5015326 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.81 52.0 5.78e-01 74.4% 83.1%
4937497 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.79 57.0 5.83e-01 78.0% 77.5%
3403645 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.78 53.0 6.11e-01 73.2% 96.7%
4228350 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.78 56.0 6.15e-01 75.6% 98.5%
3740807 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.77 58.0 5.76e-01 79.3% 76.5%
3784067 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.77 61.0 5.37e-01 85.4% 62.5%
4014318 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.76 59.0 5.88e-01 85.4% 80.0%
3578925 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.76 58.0 5.33e-01 81.7% 70.5%
3314359 320.1.1.11 a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 0.75 50.0 5.19e-01 72.0% 74.7%
3637371 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.75 58.0 5.34e-01 85.4% 64.8%
3424254 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.73 53.0 5.15e-01 75.6% 71.1%
3321720 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.73 58.0 5.22e-01 85.4% 65.5%
3653143 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.73 54.0 5.51e-01 79.3% 86.1%
3517969 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.73 57.0 5.49e-01 85.4% 87.4%
3595128 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.73 52.0 5.71e-01 79.3% 95.4%
3262749 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 58.0 5.30e-01 85.4% 71.4%
3966114 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.72 48.0 4.79e-01 72.0% 65.9%
3226102 320.1.1.1 a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H 0.72 57.0 5.21e-01 85.4% 70.4%
3395627 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.72 60.0 6.19e-01 93.9% 100.0%
5057564 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.71 54.0 4.30e-01 80.5% 41.2%
4029151 320.2.1.0 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain 0.70 48.0 5.46e-01 70.7% 98.3%
3710687 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.70 49.0 5.09e-01 74.4% 80.0%
3271024 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.70 49.0 3.79e-01 74.4% 32.1%
3785289 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 49.0 5.35e-01 74.4% 93.8%
3609147 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 54.0 5.02e-01 85.4% 66.7%
4981150 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.69 49.0 5.08e-01 74.4% 82.7%
3955112 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 47.0 4.60e-01 75.6% 64.4%
3658629 101.1.2.630 alpha arrays › HTH › HTH › winged helix domain › Methyltransf_29 0.69 50.0 4.17e-01 79.3% 45.9%
4952469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 4.95e-01 80.5% 76.7%
5056274 2003.1.5.42 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 0.67 46.0 3.55e-01 74.4% 32.8%
4011288 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.67 47.0 5.27e-01 75.6% 100.0%
3288276 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.66 46.0 4.50e-01 75.6% 66.7%
4927590 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.65 42.0 4.54e-01 73.2% 78.6%
5038360 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.64 44.0 3.08e-01 73.2% 23.7%
4965344 328.9.1.4 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › DUF5779 0.64 43.0 4.44e-01 74.4% 74.7%
4028219 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.64 44.0 4.03e-01 72.0% 86.4%
3698359 2496.1.1.2 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS 0.64 45.0 3.33e-01 75.6% 80.9%
4536664 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.63 48.0 3.52e-01 81.7% 95.0%
5028790 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.62 46.0 4.41e-01 78.0% 74.7%
4170991 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.61 43.0 3.62e-01 74.4% 42.8%
4298457 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.61 46.0 3.39e-01 81.7% 95.5%
3290605 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.61 41.0 3.72e-01 70.7% 98.3%
4945179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.17e-01 92.7% 66.9%
3961181 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.59 48.0 3.56e-01 89.0% 94.1%
3596774 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.59 40.0 3.55e-01 70.7% 59.2%
3735991 109.4.1.526 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc 0.58 49.0 2.97e-01 96.3% 30.4%
3982462 4132.1.1.1 alpha bundles › IpaD-like › IpaD-like › IpaD-like › T3SS_TC 0.58 51.0 3.50e-01 100.0% 41.7%
3929490 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.79e-01 97.6% 95.0%
3432388 109.4.1.43 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP 0.56 40.0 3.35e-01 75.6% 47.3%
4031724 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.56 38.0 3.41e-01 70.7% 64.2%
4937095 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.56 41.0 3.72e-01 78.0% 93.9%
None 0.55 42.0 3.60e-01 87.8% 49.6%
3481546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 4.33e-01 76.8% 96.9%
4168853 3775.1.1.1 beta barrels › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › Lysosome membrane protein 2 lumenal domain › CD36 0.55 41.0 2.67e-01 81.7% 17.1%
4024063 101.1.2.28 alpha arrays › HTH › HTH › winged helix domain › eIF-5_eIF-2B 0.55 43.0 4.18e-01 100.0% 76.8%
4057167 3016.1.1.2 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 0.53 38.0 4.03e-01 75.6% 84.9%
4241985 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.51 41.0 2.95e-01 90.2% 41.5%
3594508 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 41.0 2.97e-01 91.5% 83.3%
4114066 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.51 40.0 3.02e-01 90.2% 37.0%