Back to structures

OQ632216.1__WGL32634.1__Arash_gp183c__00183

Bact-Vir

OQ632216.1__WGL32634.1__Arash_gp183c__00183

Identity

Accession:
OQ632216 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-103
PDB
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.60 53.0 4.56e-01 100.0% 90.3%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.58 43.0 4.33e-01 97.1% 76.9%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 4.42e-01 100.0% 91.8%
3i9v700 3.30.920.80 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › NADH-quinone oxidoreductase, subunit 15 0.55 43.0 4.02e-01 83.5% 90.6%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 47.0 4.20e-01 100.0% 90.1%
1odhA01 2.20.25.670 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain 0.54 34.0 3.92e-01 79.6% 93.0%
3ni8A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 45.0 4.16e-01 100.0% 91.4%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 44.0 3.97e-01 100.0% 93.2%
5o7oC01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 43.0 4.10e-01 97.1% 87.2%
2wyrA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.50 40.0 3.10e-01 86.4% 97.1%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944184 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 66.0 6.64e-01 99.0% 90.5%
4927080 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 53.0 4.82e-01 100.0% 93.5%
4927653 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 36.0 4.28e-01 83.5% 100.0%
3230983 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.57 39.0 4.06e-01 70.9% 85.3%
3940247 4099.1.1.1 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.55 39.0 3.72e-01 71.8% 62.5%
4460735 3264.1.1.0 0.54 47.0 4.19e-01 100.0% 94.8%
3427768 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.51 39.0 2.77e-01 81.6% 33.2%
3239519 4099.1.1.29 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29306 0.51 38.0 3.47e-01 80.6% 70.3%
3380103 73.1.1.0 beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.51 41.0 4.16e-01 87.4% 95.0%
3291803 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.51 38.0 3.95e-01 92.2% 88.2%
6333 331.3.1.7 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › COXG 0.51 44.0 3.98e-01 100.0% 93.9%
3370130 11.1.4.16 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › EMC7_beta-sandw 0.51 37.0 3.62e-01 76.7% 86.1%
3969087 210.1.2.1 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Penicil_amidase 0.50 42.0 2.58e-01 96.1% 57.9%
D2 high residues 389-490
PDB
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 36.0 4.08e-01 76.5% 74.4%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 34.0 3.94e-01 74.5% 73.7%
1di2A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 36.0 4.24e-01 77.5% 85.5%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 36.0 4.16e-01 77.5% 83.1%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 35.0 4.18e-01 77.5% 89.7%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 40.0 3.94e-01 72.5% 73.9%
3htvA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 39.0 3.82e-01 72.5% 98.2%
4wyqB00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 34.0 3.81e-01 77.5% 84.0%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.54 46.0 4.32e-01 95.1% 78.4%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.52 37.0 2.62e-01 72.5% 47.2%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 37.0 4.04e-01 73.5% 95.1%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.52 45.0 3.53e-01 94.1% 93.9%
4m4pA02 2.60.40.1770 Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain 0.51 29.0 3.47e-01 77.5% 91.5%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 36.0 3.37e-01 72.5% 73.8%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.56e-01 77.5% 87.5%
1wchA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 35.0 2.45e-01 71.6% 40.6%
4blqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 2.85e-01 82.4% 86.1%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948387 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.75 69.0 6.01e-01 100.0% 69.3%
4940923 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 36.0 4.05e-01 74.5% 71.2%
3969970 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.62 32.0 3.72e-01 74.5% 68.0%
4220848 2484.1.1.103 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N 0.57 40.0 3.13e-01 72.5% 93.2%
3352391 2484.1.1.103 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N 0.57 39.0 3.66e-01 70.6% 75.4%
4552605 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.56 35.0 3.86e-01 77.5% 79.5%
None 0.56 39.0 3.27e-01 72.5% 66.8%
3900401 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.56 39.0 3.70e-01 72.5% 71.2%
3251342 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.55 39.0 3.69e-01 72.5% 73.3%
3655368 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.54 35.0 3.90e-01 79.4% 89.3%
3749345 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 33.0 3.68e-01 75.5% 78.8%
3505584 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 36.0 2.51e-01 71.6% 34.5%
3284847 243.1.1.80 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.51 40.0 3.94e-01 83.3% 91.7%
5030457 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.51 44.0 4.37e-01 95.1% 94.5%
3917715 2007.2.3.21 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.50 35.0 2.48e-01 71.6% 43.1%
3974132 4152.2.1.0 a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116 0.50 34.0 3.83e-01 82.4% 94.7%
D3 high residues 504-562
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pvpA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 43.0 3.23e-01 71.2% 44.5%
2o0aA00 3.40.850.20 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › 0.58 44.0 2.89e-01 98.3% 18.2%
3cihA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 45.0 3.55e-01 84.7% 60.2%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 45.0 2.78e-01 88.1% 38.2%
4gkpB00 3.40.850.20 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › 0.56 44.0 3.02e-01 93.2% 62.2%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.83e-01 100.0% 64.3%
3s8iA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 38.0 3.09e-01 81.4% 95.2%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 36.0 3.11e-01 74.6% 71.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3451730 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 42.0 3.97e-01 78.0% 51.4%
3406353 394.1.1.0 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.56 40.0 3.97e-01 78.0% 89.2%
5020293 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.55 33.0 3.65e-01 79.7% 75.6%
4160983 633.23.1.9 alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.55 42.0 2.96e-01 84.7% 54.1%
3958173 4294.1.1.0 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.54 38.0 3.77e-01 78.0% 89.2%
D4 high residues 859-962
PDB
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.64 47.0 5.06e-01 94.2% 94.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.52e-01 92.3% 73.8%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.46e-01 92.3% 71.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 4.36e-01 94.2% 76.2%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 41.0 4.45e-01 92.3% 95.0%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.15e-01 94.2% 71.3%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 3.74e-01 90.4% 66.0%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.43e-01 94.2% 89.0%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.51 36.0 3.68e-01 85.6% 74.8%
1vloA01 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.51 39.0 3.53e-01 80.8% 67.1%
2fckA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 38.0 3.31e-01 82.7% 96.5%
4aybL00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.50 33.0 3.53e-01 84.6% 76.9%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 45.0 4.52e-01 92.3% 73.8%
3739675 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 46.0 4.54e-01 92.3% 75.5%
3367445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 52.0 4.65e-01 94.2% 81.4%
2056822 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.60 39.0 4.40e-01 84.6% 90.8%
3216573 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.44e-01 97.1% 71.2%
4983310 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.59 42.0 4.32e-01 93.3% 77.0%
5065934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.58 43.0 4.66e-01 94.2% 96.5%
4404596 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 39.0 3.70e-01 92.3% 56.9%
3282970 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 36.0 4.29e-01 82.7% 100.0%
4012917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 4.77e-01 100.0% 95.8%
3784212 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 41.0 4.18e-01 91.3% 77.1%
4545670 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.56 43.0 4.43e-01 94.2% 87.9%
3164764 2008.1.1.168 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 0.55 42.0 4.53e-01 95.2% 98.8%
3175221 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.37e-01 100.0% 85.7%
3269500 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 4.38e-01 97.1% 86.9%
3982864 101.1.2.658 alpha arrays › HTH › HTH › winged helix domain › DUF5983 0.52 36.0 3.88e-01 84.6% 88.1%
5075560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 44.0 3.86e-01 98.1% 64.5%
D5 medium residues 111-233
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.87 76.0 7.57e-01 100.0% 89.0%
5w36B01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.85 78.0 7.52e-01 100.0% 88.1%
1eqnB01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.84 74.0 7.38e-01 95.9% 89.7%
4edgA01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.84 78.0 7.56e-01 100.0% 89.6%
1q15A01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 46.0 3.90e-01 94.3% 97.6%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.93e-01 87.8% 92.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4099289 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.88 79.0 7.72e-01 99.2% 87.7%
3387388 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.88 77.0 7.67e-01 98.4% 89.6%
4096247 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.87 77.0 7.67e-01 99.2% 90.4%
1407259 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.87 76.0 7.62e-01 100.0% 90.4%
4431937 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.86 82.0 7.74e-01 99.2% 87.1%
3589490 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.84 79.0 7.67e-01 99.2% 91.1%
4186968 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.84 74.0 7.30e-01 99.2% 87.7%
4345683 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.83 73.0 7.28e-01 99.2% 90.4%
4206082 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.82 74.0 7.29e-01 99.2% 90.0%
4157635 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.82 73.0 7.28e-01 99.2% 92.0%
5003469 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.80 74.0 7.06e-01 99.2% 85.0%
4043621 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.80 76.0 7.14e-01 100.0% 90.3%
4588732 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.80 75.0 7.30e-01 100.0% 93.3%
3948312 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.69 48.0 5.29e-01 94.3% 87.0%
3391248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 37.0 3.86e-01 95.1% 69.6%
5034351 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 25.0 3.33e-01 87.0% 81.8%
4244248 210.1.3.2 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › CarA_N 0.55 45.0 3.88e-01 91.1% 97.1%
4442638 320.4.1.1 a+b two layers › R3H domain-like › PUB domain › PUB domain › TIMELESS_C 0.52 40.0 4.03e-01 87.8% 81.6%
4937515 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.50 31.0 3.55e-01 100.0% 84.4%
D6 medium residues 234-379
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13155.13 best Toprim_2 31.0 3.80e-07 58.9% 95.5%
CATH (78)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fcjB00 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.86 59.0 6.56e-01 74.0% 86.4%
1q57G02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.81 67.0 7.23e-01 91.1% 100.0%
5gujA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.81 67.0 7.22e-01 88.4% 100.0%
5vazA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.78 66.0 7.02e-01 88.4% 100.0%
2au3A03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.78 63.0 6.85e-01 88.4% 100.0%
6tg6A01 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.77 54.0 6.34e-01 71.2% 100.0%
2n3zA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.77 44.0 5.29e-01 72.6% 83.8%
2q5cA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 42.0 5.07e-01 74.7% 89.7%
4da9B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 50.0 4.41e-01 76.0% 93.5%
5thqA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 50.0 4.20e-01 76.0% 95.2%
4j1qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 54.0 3.83e-01 82.9% 80.1%
1g0nB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 4.12e-01 76.0% 89.8%
2b4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 50.0 4.18e-01 76.7% 93.1%
5b1yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 50.0 4.24e-01 76.7% 94.9%
6d9yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 50.0 4.18e-01 77.4% 92.8%
6pznB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 4.17e-01 76.7% 95.9%
3o38B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 49.0 4.21e-01 76.7% 91.1%
3wtbC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 49.0 4.16e-01 77.4% 95.9%
5bt9D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 49.0 4.12e-01 76.7% 91.0%
1dcfA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 48.0 4.99e-01 74.7% 90.2%
2o1sB03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 53.0 5.64e-01 87.0% 98.4%
4dzzA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 46.0 4.15e-01 74.0% 97.1%
1a04A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 46.0 4.99e-01 74.0% 96.0%
2b4aA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 46.0 5.09e-01 74.0% 96.6%
6ouvA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 52.0 5.41e-01 85.6% 93.9%
1a2oA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 47.0 4.91e-01 76.7% 97.0%
4e21A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 45.0 4.25e-01 74.7% 76.7%
6jimB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 39.0 4.06e-01 79.5% 66.9%
1gu7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 43.0 4.03e-01 70.5% 82.9%
5je8B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 46.0 4.45e-01 77.4% 98.2%
2qv7A01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.62 47.0 4.72e-01 78.8% 86.2%
2uyyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 46.0 4.40e-01 77.4% 96.4%
3l6dA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 46.0 4.44e-01 77.4% 97.6%
2gf2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 46.0 4.43e-01 77.4% 100.0%
2csuA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.61 44.0 4.23e-01 73.3% 90.4%
4d3dA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 45.0 4.38e-01 76.0% 98.7%
2ah5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 42.0 4.31e-01 71.9% 98.6%
3ws7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 45.0 4.30e-01 78.8% 97.7%
3qhaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 44.0 4.35e-01 76.7% 99.4%
1vi6C01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 42.0 3.89e-01 71.2% 60.1%
4ezbA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 46.0 4.32e-01 80.8% 92.8%
3ed5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 42.0 4.26e-01 71.9% 95.9%
4dw8A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.60 43.0 4.15e-01 72.6% 100.0%
2eklA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 43.0 4.65e-01 74.0% 93.4%
7uehA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.59 37.0 4.03e-01 82.2% 75.2%
1rljA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 43.0 4.42e-01 74.0% 85.2%
3bchA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 42.0 3.87e-01 72.6% 58.3%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.59 41.0 3.62e-01 71.9% 93.6%
2x7jA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.59 43.0 3.94e-01 76.0% 76.4%
3umcA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 42.0 4.16e-01 74.0% 96.1%
4toiA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.58 41.0 3.87e-01 71.9% 61.8%
3pk0D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 44.0 3.64e-01 78.1% 90.3%
1zghA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.58 42.0 4.09e-01 75.3% 93.3%
2cvzA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 42.0 4.21e-01 77.4% 100.0%
3nuqA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.57 45.0 4.29e-01 81.5% 91.7%
1v4vA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 47.0 4.62e-01 87.7% 100.0%
5temA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 43.0 4.20e-01 77.4% 94.3%
3ijpB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 42.0 4.17e-01 77.4% 94.3%
6xo2A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 38.0 4.46e-01 80.1% 95.2%
4hlnA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 45.0 4.04e-01 85.6% 85.3%
1iy8A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 44.0 3.70e-01 82.9% 90.7%
5vyqA01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.56 43.0 4.07e-01 80.1% 95.5%
2gfhA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 40.0 3.90e-01 73.3% 88.1%
2waaA02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.56 48.0 4.27e-01 93.2% 67.9%
4xrpA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.56 38.0 3.99e-01 71.9% 77.5%
2lpmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 40.0 4.26e-01 74.7% 90.2%
1yvuA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 41.0 3.60e-01 76.7% 72.4%
2hdoA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.55 39.0 3.95e-01 72.6% 98.6%
6gnaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 39.0 3.69e-01 74.7% 94.9%
1vm6B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 40.0 4.13e-01 77.4% 91.1%
6ktqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 42.0 3.38e-01 82.2% 50.9%
3e9qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.79e-01 92.5% 65.5%
3ausA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.71e-01 91.8% 67.2%
1te2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 38.0 3.88e-01 75.3% 97.9%
1h5qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.74e-01 92.5% 70.4%
2ewvA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 41.0 3.48e-01 81.5% 73.9%
8k5lA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 40.0 3.67e-01 86.3% 59.6%
2hnhA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.50 42.0 3.42e-01 89.7% 67.0%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4622340 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.82 63.0 6.65e-01 82.2% 87.7%
4185535 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.82 57.0 6.48e-01 74.7% 93.6%
3583702 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.81 64.0 7.06e-01 90.4% 100.0%
4579325 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.81 58.0 6.67e-01 74.7% 97.3%
4078805 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.81 66.0 7.12e-01 91.8% 100.0%
3948019 2006.1.3.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_3 0.80 61.0 6.86e-01 81.5% 100.0%
4524852 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.80 61.0 6.83e-01 78.1% 99.1%
4041525 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.80 63.0 6.96e-01 83.6% 100.0%
4504313 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.80 65.0 7.07e-01 86.3% 100.0%
4426393 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.79 67.0 7.09e-01 87.7% 100.0%
4437562 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.79 65.0 7.07e-01 88.4% 100.0%
4507511 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.79 69.0 6.25e-01 91.1% 77.4%
3517999 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.79 65.0 7.00e-01 87.7% 100.0%
4092166 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.79 57.0 6.32e-01 74.7% 92.5%
3519195 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.79 62.0 6.82e-01 83.6% 100.0%
4653529 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.78 57.0 6.48e-01 74.7% 98.2%
3400630 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.78 61.0 6.73e-01 84.9% 100.0%
None 0.77 59.0 6.44e-01 79.5% 95.8%
4441825 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.76 62.0 6.71e-01 84.9% 100.0%
4023806 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.76 64.0 6.46e-01 87.0% 100.0%
4803443 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.76 57.0 6.22e-01 77.4% 94.2%
5068253 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.73 55.0 5.78e-01 80.1% 86.2%
4951567 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.72 51.0 5.86e-01 81.5% 100.0%
4298485 7522.1.1.8 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PF31012 0.69 54.0 5.74e-01 85.6% 91.5%
4959809 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.69 51.0 5.52e-01 88.4% 91.7%
5012303 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.69 49.0 4.90e-01 72.6% 95.3%
5023166 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.69 53.0 5.35e-01 80.1% 97.2%
4944209 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.69 56.0 5.91e-01 85.6% 100.0%
4936294 2007.1.3.73 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › DUF2325 0.67 44.0 4.98e-01 73.3% 87.3%
5071855 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.67 54.0 5.20e-01 85.6% 74.5%
5017188 7522.1.1.6 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PF30897 0.67 53.0 5.13e-01 85.6% 73.3%
4980682 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.67 47.0 5.41e-01 76.0% 99.0%
4952716 7522.1.1.0 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.67 53.0 5.57e-01 84.9% 90.4%
5048968 7569.1.1.2 a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › DUF5591 0.67 57.0 5.17e-01 89.7% 89.5%
5049470 7522.1.1.6 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PF30897 0.67 55.0 5.25e-01 85.6% 78.8%
5016612 7574.1.1.4 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › POR_N 0.66 55.0 4.27e-01 89.0% 78.7%
4258691 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.65 47.0 4.55e-01 74.0% 78.8%
5040779 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.63 45.0 4.04e-01 72.6% 62.5%
1174261 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.63 46.0 4.49e-01 76.7% 99.4%
None 0.62 46.0 4.49e-01 76.0% 99.4%
3989786 2010.1.1.4 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › FakA-like_C 0.62 48.0 5.20e-01 84.2% 96.8%
4581264 7512.1.1.16 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Capsule_synth 0.61 49.0 3.67e-01 86.3% 35.3%
3450433 2007.6.1.1 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › Ribosomal_S2 0.61 43.0 4.19e-01 72.6% 71.2%
None 0.60 45.0 4.40e-01 76.7% 100.0%
4968422 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.60 42.0 3.66e-01 72.6% 95.0%
4885875 2003.1.11.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like 0.59 45.0 4.77e-01 80.8% 100.0%
3979167 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.59 44.0 4.66e-01 76.7% 95.2%
5044880 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.59 41.0 3.59e-01 71.9% 95.4%
4942261 7516.1.1.1 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase 0.58 38.0 3.23e-01 72.6% 41.3%
3708549 2002.1.1.25 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like 0.58 45.0 3.46e-01 95.2% 37.1%
5064285 2006.1.1.14 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD 0.58 42.0 3.72e-01 74.0% 99.5%
4608197 2003.1.1.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.58 43.0 4.50e-01 78.1% 92.6%
4106500 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.57 41.0 3.35e-01 72.6% 85.1%
3209687 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.57 36.0 3.41e-01 80.8% 52.9%
3254521 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.57 39.0 4.11e-01 84.2% 77.7%
4936363 2007.13.1.0 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit 0.56 40.0 3.69e-01 73.3% 95.8%
5005056 7582.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD 0.56 44.0 4.69e-01 83.6% 93.8%
4508942 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.56 39.0 3.33e-01 72.6% 92.8%
3935607 2498.1.1.2 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Astacin 0.56 34.0 3.71e-01 74.0% 73.3%
5021213 2007.1.14.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.55 42.0 4.24e-01 80.1% 86.7%
3958136 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.54 36.0 3.04e-01 74.0% 39.6%
4461939 2002.1.1.28 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.54 41.0 3.70e-01 79.5% 69.5%
3588147 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.53 39.0 2.80e-01 76.0% 58.8%
None 0.52 38.0 3.41e-01 74.7% 98.0%
3290013 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.52 44.0 3.70e-01 91.8% 71.9%
4370676 2002.1.1.102 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.51 42.0 3.51e-01 88.4% 66.5%
D7 medium residues 568-622_752-856
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5u56A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.56 28.0 3.28e-01 78.1% 66.1%
5cy5B00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.53 29.0 3.02e-01 90.0% 55.7%
3rm5B02 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.50 36.0 3.26e-01 73.8% 82.6%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.50 27.0 2.95e-01 96.2% 60.5%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.50 27.0 3.17e-01 81.2% 73.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3794996 192.12.1.0 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM 0.54 26.0 2.71e-01 79.4% 47.3%
3887645 633.21.1.10 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL 0.51 26.0 2.89e-01 76.9% 57.7%
D8 medium residues 623-751
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vkgA17 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 63.0 6.41e-01 97.7% 87.9%
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 70.0 5.88e-01 100.0% 60.9%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 65.0 6.11e-01 99.2% 75.5%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 70.0 5.01e-01 99.2% 43.0%
3t15A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 66.0 6.19e-01 100.0% 77.4%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.65e-01 99.2% 88.6%
3vkhB09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.13e-01 99.2% 82.0%
3ja8204 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 5.04e-01 100.0% 46.4%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 62.0 5.92e-01 97.7% 75.3%
1iqpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 67.0 6.09e-01 100.0% 73.2%
3vkgA07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 4.87e-01 100.0% 39.5%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 70.0 6.06e-01 100.0% 80.4%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 66.0 5.37e-01 96.9% 82.4%
1g8pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 5.71e-01 98.4% 85.9%
4akgA12 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 62.0 6.46e-01 96.9% 98.3%
5kwaA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 64.0 5.78e-01 96.9% 72.8%
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 65.0 4.82e-01 100.0% 48.4%
1a5tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 66.0 5.97e-01 100.0% 86.2%
1sxjA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 64.0 5.71e-01 99.2% 71.5%
2iusA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 64.0 4.81e-01 100.0% 70.7%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 61.0 5.94e-01 97.7% 98.6%
5o6bB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 5.31e-01 98.4% 92.5%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 56.0 4.82e-01 96.9% 82.9%
2i7xA02 3.40.50.10890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 48.0 4.19e-01 79.1% 100.0%
2r8rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 58.0 4.90e-01 100.0% 76.6%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 58.0 5.11e-01 100.0% 81.8%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 5.05e-01 97.7% 100.0%
1z6aA01 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.62 57.0 4.80e-01 98.4% 91.3%
4xqkB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 4.69e-01 99.2% 92.4%
1poxA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.62 55.0 4.77e-01 95.3% 79.5%
1olxB02 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.61 53.0 4.59e-01 94.6% 75.1%
3vu9B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 4.67e-01 96.9% 97.9%
3mwyW03 3.40.50.10810 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain 0.60 55.0 4.28e-01 100.0% 72.4%
2nxwA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.59 52.0 4.52e-01 95.3% 74.0%
1z5zB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 4.14e-01 99.2% 67.7%
1uejB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 53.0 4.46e-01 100.0% 88.9%
1a2oA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 42.0 4.24e-01 93.8% 77.4%
2zejB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 38.0 4.24e-01 80.6% 89.1%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.55 46.0 4.52e-01 98.4% 83.1%
7a8rA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.17e-01 95.3% 96.0%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.21e-01 100.0% 71.0%
3qkiB01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.55 49.0 3.55e-01 100.0% 88.9%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.24e-01 100.0% 88.3%
2plrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.20e-01 100.0% 88.7%
1e9fA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.25e-01 100.0% 83.7%
1ve3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 46.0 3.92e-01 93.0% 86.3%
2gn4B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 48.0 3.91e-01 97.7% 66.5%
5dclA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 40.0 4.18e-01 97.7% 85.5%
3clkB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 44.0 4.56e-01 93.0% 93.4%
5c3uA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 34.0 3.80e-01 72.9% 84.4%
5l3qA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 47.0 3.99e-01 100.0% 59.2%
3gemD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 4.01e-01 99.2% 84.1%
3e48A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 4.20e-01 98.4% 77.6%
3rc3A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 4.11e-01 99.2% 77.9%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.53 44.0 3.00e-01 89.9% 31.1%
2f5tX01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.52 38.0 3.76e-01 76.7% 93.5%
2gruA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 46.0 4.24e-01 100.0% 92.4%
1f8yA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 45.0 4.29e-01 97.7% 84.6%
5vogA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.97e-01 93.8% 81.8%
2qvgA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 41.0 4.15e-01 98.4% 87.5%
3qivA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 44.0 3.93e-01 98.4% 84.9%
2vk1A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 45.0 4.02e-01 98.4% 87.7%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 3.99e-01 82.9% 97.7%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4931926 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 75.0 5.48e-01 100.0% 39.0%
3975473 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.82 77.0 5.77e-01 100.0% 47.2%
5058121 2004.1.1.1224 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF31144 0.81 75.0 5.57e-01 100.0% 42.0%
5018481 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.81 76.0 5.76e-01 100.0% 45.3%
4926850 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.81 71.0 6.62e-01 100.0% 76.8%
5013281 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 76.0 5.72e-01 100.0% 47.4%
3944606 2004.1.1.136 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 0.80 75.0 5.67e-01 100.0% 47.0%
3594982 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.79 74.0 5.75e-01 100.0% 58.5%
2810781 8001.1.1.1 alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C 0.79 70.0 5.77e-01 100.0% 55.2%
3703312 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 74.0 5.09e-01 100.0% 38.5%
None 0.78 74.0 6.49e-01 100.0% 71.7%
3957998 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.78 74.0 6.18e-01 100.0% 79.0%
5059517 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.78 73.0 5.99e-01 100.0% 75.5%
4552869 2004.1.1.2 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.78 72.0 5.89e-01 97.7% 73.2%
3952423 2004.1.1.339 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 0.78 73.0 5.63e-01 100.0% 49.1%
3390911 138.1.1.13 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › AAA 0.77 72.0 5.21e-01 99.2% 40.6%
3959685 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 73.0 6.48e-01 100.0% 79.4%
3290153 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.77 73.0 6.28e-01 100.0% 73.7%
None 0.77 72.0 6.50e-01 99.2% 75.3%
None 0.77 71.0 6.56e-01 97.7% 78.8%
None 0.77 71.0 6.55e-01 97.7% 78.8%
4134156 2004.1.1.125 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N 0.77 71.0 6.58e-01 98.4% 79.4%
None 0.77 71.0 6.39e-01 97.7% 74.1%
None 0.77 72.0 6.43e-01 100.0% 73.7%
4069782 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 72.0 5.58e-01 100.0% 48.7%
5064031 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 70.0 5.09e-01 100.0% 38.2%
None 0.77 71.0 6.59e-01 98.4% 79.4%
3254493 2004.1.1.153 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_2 0.77 71.0 5.56e-01 100.0% 73.8%
None 0.77 71.0 6.14e-01 98.4% 66.8%
4518390 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.76 71.0 6.33e-01 99.2% 82.9%
None 0.76 70.0 6.30e-01 97.7% 74.1%
4026992 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 70.0 4.58e-01 99.2% 28.3%
4974815 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 69.0 5.90e-01 97.7% 73.3%
4443044 2004.1.1.1014 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 0.75 70.0 5.18e-01 100.0% 42.3%
None 0.75 69.0 4.51e-01 98.4% 28.3%
4507179 1.1.9.48 beta barrels › cradle loop barrel › RIFT-related › PUA domain › AAA 0.75 69.0 4.36e-01 99.2% 24.7%
4314819 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.75 68.0 5.88e-01 100.0% 65.1%
3510197 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 69.0 4.53e-01 100.0% 28.1%
None 0.75 69.0 5.42e-01 98.4% 57.6%
5017997 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.74 69.0 4.57e-01 99.2% 30.0%
4002451 2004.1.1.93 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.74 68.0 5.91e-01 100.0% 67.6%
4098347 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 68.0 4.52e-01 98.4% 29.5%
4372262 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.74 69.0 4.91e-01 100.0% 41.9%
None 0.74 68.0 5.60e-01 99.2% 79.6%
None 0.74 69.0 4.54e-01 100.0% 29.4%
5011495 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 66.0 5.63e-01 100.0% 62.0%
3612543 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 65.0 5.91e-01 99.2% 73.3%
3575760 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.73 65.0 5.83e-01 100.0% 70.3%
4973289 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.22e-01 100.0% 50.2%
1112963 2004.1.1.35 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.72 64.0 6.18e-01 99.2% 84.6%
4959586 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.72 66.0 5.08e-01 100.0% 45.9%
3967690 2004.1.1.319 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 0.71 64.0 5.59e-01 100.0% 67.0%
3675905 2004.1.1.187 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 0.71 66.0 5.78e-01 100.0% 75.1%
3438442 2004.1.1.292 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase 0.70 66.0 5.33e-01 99.2% 83.1%
3366448 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 63.0 5.36e-01 98.4% 71.7%
None 0.69 65.0 4.77e-01 100.0% 63.9%
3717212 2004.1.1.93 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.69 61.0 5.96e-01 100.0% 87.9%
4017436 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 63.0 5.03e-01 97.7% 55.4%
3607334 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 61.0 5.69e-01 97.7% 79.4%
3719943 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.68 62.0 5.61e-01 100.0% 80.0%
3640694 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.68 61.0 5.08e-01 97.7% 78.6%
5016677 2004.1.1.319 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 0.67 62.0 5.07e-01 100.0% 61.3%
5004384 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 5.24e-01 100.0% 83.6%
3631263 2004.1.1.110 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 0.66 61.0 5.17e-01 100.0% 73.7%
5061526 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.64 59.0 4.75e-01 100.0% 74.3%
4030483 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.63 57.0 3.79e-01 100.0% 37.5%
3784438 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.61 56.0 4.70e-01 100.0% 76.7%
1720447 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.56 47.0 4.35e-01 92.2% 92.8%
3633603 2004.1.1.33 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C,RecQ_Zn_bind 0.54 48.0 3.63e-01 99.2% 89.5%
3403962 7529.1.1.0 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like 0.54 47.0 4.34e-01 93.0% 97.5%
4245687 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.54 46.0 4.13e-01 93.0% 98.3%
4242927 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.53 46.0 4.20e-01 93.8% 99.4%
3703237 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.53 42.0 3.85e-01 82.9% 67.7%
4980549 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.53 45.0 4.13e-01 93.8% 97.7%
4342185 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.53 44.0 4.09e-01 93.0% 97.6%
4667440 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.52 44.0 4.01e-01 93.0% 97.2%
5049963 2007.2.1.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.52 46.0 4.20e-01 98.4% 77.7%
4440590 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.52 44.0 4.03e-01 93.8% 99.4%
4587209 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.52 43.0 3.97e-01 92.2% 95.9%
3786266 2004.1.1.495 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC10_1st 0.52 42.0 3.80e-01 89.1% 91.4%
4130076 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.52 42.0 3.92e-01 92.2% 96.0%
5076496 300.1.1.6 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB 0.50 38.0 3.74e-01 78.3% 99.3%
141518 7529.1.1.3 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N 0.50 43.0 4.03e-01 93.8% 95.6%
3972255 2011.2.1.0 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like 0.50 35.0 3.67e-01 99.2% 78.3%