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OQ633420.1__WEV90007.1__X__00010

Bact-Vir

OQ633420.1__WEV90007.1__X__00010

Identity

Accession:
OQ633420 ↗
Kingdom:
phage

Quality

87.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-44
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k1hA00 3.30.1120.180 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 0.74 64.0 4.63e-01 100.0% 88.7%
4hizA01 3.30.750.60 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Endosialidase, N-terminal extension domain 0.74 56.0 5.59e-01 85.0% 83.3%
2dirA01 3.30.2300.10 Alpha Beta › 2-Layer Sandwich › THUMP fold › THUMP superfamily 0.68 53.0 4.07e-01 85.0% 67.8%
3ixqA01 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.68 49.0 3.38e-01 80.0% 22.4%
3varA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.67 55.0 3.33e-01 100.0% 32.6%
4ic1D00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.67 52.0 3.36e-01 90.0% 25.7%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 55.0 3.51e-01 100.0% 22.0%
2wtpA00 2.60.40.2280 Mainly Beta › Sandwich › Immunoglobulin-like › Heavy-metal resistance protein CzcE 0.66 56.0 4.35e-01 100.0% 52.7%
4on1A01 2.40.128.470 Mainly Beta › Beta Barrel › Lipocalin › 0.66 54.0 3.84e-01 100.0% 47.5%
3a1pB00 3.30.860.10 Alpha Beta › 2-Layer Sandwich › 30s Ribosomal Protein S19; Chain A › Ribosomal protein S19/S15 0.66 54.0 4.40e-01 100.0% 75.3%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.65 52.0 4.04e-01 100.0% 61.5%
1cseI00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.65 47.0 4.12e-01 80.0% 60.3%
1f56A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.65 53.0 4.17e-01 95.0% 78.0%
3cnrB00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.64 53.0 4.20e-01 100.0% 86.0%
3w0eA00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.64 48.0 4.09e-01 80.0% 52.9%
4lqeA00 3.40.1350.140 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like 0.64 52.0 3.67e-01 100.0% 67.1%
3x3nA04 2.40.50.910 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type VII secretion system EccB, repeat 3 domain 0.63 43.0 3.44e-01 75.0% 37.1%
4k22A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.62 51.0 3.88e-01 100.0% 57.4%
1bwzA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.61 47.0 3.47e-01 92.5% 47.2%
7uzsX01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.10e-01 80.0% 79.4%
4iumA00 3.90.70.160 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 46.0 3.37e-01 90.0% 40.2%
7xkcA01 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.59 42.0 3.51e-01 80.0% 44.4%
4xg1A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.58 43.0 2.91e-01 85.0% 71.0%
2q6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.58 43.0 3.39e-01 100.0% 34.0%
2cx0A02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.57 47.0 3.87e-01 100.0% 92.8%
7r9xA02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.57 50.0 3.09e-01 100.0% 25.6%
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 46.0 3.04e-01 100.0% 20.7%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.56 45.0 3.84e-01 95.0% 82.4%
1a10I00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.55 40.0 3.69e-01 90.0% 58.7%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.55 42.0 3.59e-01 90.0% 69.3%
2zbvC02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.54 41.0 3.26e-01 92.5% 57.8%
2iksB02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 44.0 2.99e-01 100.0% 35.2%
4oc8A01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.54 41.0 2.73e-01 90.0% 82.8%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.54 40.0 3.70e-01 97.5% 92.4%
5gjnA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 40.0 2.89e-01 90.0% 40.0%
1knwA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.53 38.0 2.65e-01 87.5% 82.4%
1tocR01 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.52 35.0 3.38e-01 70.0% 59.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.51e-01 90.0% 67.2%
1tx3D00 3.40.600.10 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II 0.51 37.0 2.39e-01 85.0% 72.5%
5i7pA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 36.0 3.47e-01 77.5% 83.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3443972 292.1.1.1 a+b two layers › RIP/Polo-box domain › Ribosome inactivating proteins (RIP) › Ribosome inactivating proteins (RIP) › RIP 0.75 65.0 3.96e-01 100.0% 29.2%
4117423 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.74 58.0 4.80e-01 90.0% 66.7%
4318395 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.73 57.0 4.72e-01 90.0% 69.3%
5081645 7528.1.1.1 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I 0.73 62.0 4.39e-01 100.0% 60.0%
3237747 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.72 59.0 3.83e-01 95.0% 35.3%
3387411 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.72 56.0 4.71e-01 87.5% 77.1%
4958464 2008.1.1.205 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26915 0.72 55.0 3.96e-01 85.0% 30.0%
5081349 2008.2.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo 0.72 54.0 4.11e-01 87.5% 45.7%
4127806 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.71 55.0 4.43e-01 90.0% 65.9%
4501779 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.71 55.0 4.50e-01 90.0% 63.7%
4400628 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.70 55.0 4.50e-01 90.0% 64.6%
3263356 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.70 59.0 4.73e-01 100.0% 54.1%
3289749 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.69 54.0 4.57e-01 90.0% 67.1%
5028251 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.69 56.0 4.27e-01 100.0% 57.3%
3838290 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.69 54.0 4.67e-01 87.5% 73.8%
3222851 2011.1.1.7 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M18 0.69 56.0 3.37e-01 100.0% 32.2%
3958547 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 56.0 4.93e-01 100.0% 86.2%
4028209 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.68 54.0 4.56e-01 95.0% 50.7%
3246899 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 4.01e-01 97.5% 55.2%
3485191 2011.1.1.7 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M18 0.67 54.0 3.21e-01 100.0% 29.6%
3200459 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.67 56.0 5.03e-01 100.0% 78.3%
3784823 2011.1.1.7 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M18 0.67 54.0 3.24e-01 100.0% 31.3%
4312484 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.67 57.0 4.28e-01 100.0% 95.2%
4072785 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.67 56.0 4.44e-01 100.0% 52.2%
1308296 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.67 52.0 4.08e-01 90.0% 53.8%
5000283 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.67 58.0 3.60e-01 100.0% 17.8%
4459239 3585.1.1.0 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain 0.67 52.0 4.25e-01 90.0% 63.7%
4502451 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.66 54.0 4.35e-01 100.0% 52.2%
4178130 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.66 55.0 4.37e-01 100.0% 52.2%
5000680 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.66 54.0 3.91e-01 100.0% 36.2%
4554927 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.66 55.0 4.23e-01 100.0% 97.0%
4379675 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.66 55.0 4.22e-01 100.0% 47.0%
5028252 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.66 55.0 4.23e-01 100.0% 48.0%
4944227 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.66 54.0 3.91e-01 100.0% 43.1%
3652650 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.65 53.0 4.04e-01 100.0% 42.7%
3695189 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 53.0 3.35e-01 100.0% 23.8%
3707544 1143.1.1.0 beta sandwiches › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit › beta sandwich domain in acetophenone carboxylase (Apc) alpha subunit 0.65 48.0 4.05e-01 95.0% 47.1%
4476653 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.65 55.0 3.45e-01 100.0% 19.1%
4056470 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.65 49.0 4.10e-01 90.0% 63.7%
3972532 294.1.1.2 a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 0.65 48.0 4.15e-01 80.0% 56.2%
3585546 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.64 48.0 3.06e-01 85.0% 15.0%
3834784 838.1.1.0 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 0.64 51.0 3.43e-01 100.0% 24.9%
3965466 3585.1.1.1 a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C 0.63 50.0 4.08e-01 90.0% 63.3%
2051780 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.63 44.0 3.14e-01 80.0% 22.6%
1555595 838.1.1.1 a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.63 50.0 3.65e-01 100.0% 34.8%
5019949 4294.1.1.1 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske 0.61 45.0 3.55e-01 92.5% 35.8%
44191 3002.1.1.1 beta complex topology › Adsorption protein p2, insertion domain › Adsorption protein p2, insertion domain › Adsorption protein p2, insertion domain › Prd1-P2 0.61 43.0 2.77e-01 85.0% 14.8%
5041230 375.13.1.0 few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain 0.61 42.0 3.99e-01 100.0% 60.0%
3674451 294.1.1.1 a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit 0.60 43.0 3.81e-01 80.0% 56.9%
4053223 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 50.0 3.73e-01 100.0% 54.8%
4563441 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.60 48.0 3.26e-01 100.0% 24.3%
5035333 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.59 44.0 3.46e-01 100.0% 35.0%
3398771 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.59 39.0 2.42e-01 100.0% 11.0%
3789628 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 48.0 2.89e-01 100.0% 21.8%
3966790 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.59 48.0 3.41e-01 100.0% 43.4%
3513072 323.1.1.6 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf 0.58 46.0 3.08e-01 100.0% 30.3%
3967031 2498.1.1.10 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48 0.57 45.0 2.91e-01 92.5% 29.5%
3471366 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 3.38e-01 97.5% 48.0%
3607805 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.56 37.0 2.26e-01 100.0% 10.0%
3635354 2004.1.1.685 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HET 0.54 43.0 2.74e-01 95.0% 28.9%
4996262 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.53 41.0 3.22e-01 95.0% 59.0%
1140436 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.52 38.0 2.33e-01 90.0% 29.6%
4887092 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 41.0 3.45e-01 100.0% 72.6%
4932970 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 41.0 3.22e-01 100.0% 67.6%
3263885 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.52 44.0 2.60e-01 100.0% 20.0%
4937312 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 37.0 3.04e-01 82.5% 66.3%
D2 high residues 58-153
PDB