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OQ633420.1__WEV90011.1__X__00014
Bact-VirOQ633420.1__WEV90011.1__X__00014
Identity
- Accession:
- OQ633420 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-105
Domain cluster:
rep: MW651859.1__QSH74591.1__pAN_17__00017__D8-87
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.66 | 56.0 | 5.28e-01 | 91.8% | 97.4% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 50.0 | 5.49e-01 | 86.6% | 100.0% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 52.0 | 5.40e-01 | 86.6% | 91.3% |
| 5eanA01 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 51.0 | 4.99e-01 | 85.6% | 80.6% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 52.0 | 5.22e-01 | 86.6% | 85.7% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 44.0 | 4.65e-01 | 80.4% | 80.5% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 50.0 | 5.18e-01 | 86.6% | 90.1% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 49.0 | 5.18e-01 | 87.6% | 98.8% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.62 | 50.0 | 4.93e-01 | 86.6% | 83.7% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 56.0 | 3.66e-01 | 100.0% | 52.8% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 51.0 | 5.12e-01 | 91.8% | 97.0% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 30.0 | 3.60e-01 | 86.6% | 68.8% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 50.0 | 4.83e-01 | 91.8% | 91.1% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 51.0 | 4.53e-01 | 91.8% | 73.0% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 47.0 | 4.62e-01 | 86.6% | 97.1% |
| 2r0lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 44.0 | 4.22e-01 | 79.4% | 78.8% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 49.0 | 4.97e-01 | 91.8% | 96.9% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.59 | 36.0 | 3.78e-01 | 87.6% | 64.8% |
| 2zl7A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.59 | 50.0 | 5.13e-01 | 94.8% | 98.9% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 29.0 | 3.45e-01 | 86.6% | 71.6% |
| 2qbuA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.57 | 33.0 | 3.36e-01 | 86.6% | 57.3% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 44.0 | 4.28e-01 | 86.6% | 85.6% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.21e-01 | 92.8% | 80.2% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.56 | 44.0 | 4.05e-01 | 86.6% | 71.2% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 44.0 | 4.67e-01 | 91.8% | 97.6% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.18e-01 | 97.9% | 80.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.54 | 42.0 | 3.79e-01 | 87.6% | 59.4% |
| 2ijzA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.54 | 44.0 | 4.35e-01 | 91.8% | 99.1% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 42.0 | 4.37e-01 | 85.6% | 96.6% |
| 4odbA00 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.54 | 42.0 | 3.63e-01 | 86.6% | 58.6% |
| 1cfbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.97e-01 | 95.9% | 74.5% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.53 | 42.0 | 3.71e-01 | 86.6% | 79.2% |
| 5i4dA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 29.0 | 3.16e-01 | 86.6% | 64.5% |
| 4kktA01 | 2.40.420.20 | Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › | 0.52 | 37.0 | 3.81e-01 | 86.6% | 77.1% |
| 1flkA00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.52 | 41.0 | 3.30e-01 | 87.6% | 71.2% |
| 7b5tC01 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.52 | 30.0 | 3.45e-01 | 86.6% | 78.9% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.90e-01 | 96.9% | 81.9% |
| 1od3A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 38.0 | 3.47e-01 | 87.6% | 58.8% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 35.0 | 3.50e-01 | 72.2% | 100.0% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.50 | 32.0 | 3.63e-01 | 91.8% | 85.1% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3387360 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.79 | 57.0 | 6.05e-01 | 91.8% | 84.7% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.76 | 55.0 | 6.10e-01 | 95.9% | 97.3% |
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 54.0 | 5.99e-01 | 91.8% | 96.0% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.75 | 53.0 | 5.91e-01 | 91.8% | 94.7% |
| 3597282 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.74 | 55.0 | 6.05e-01 | 95.9% | 95.0% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 53.0 | 5.06e-01 | 91.8% | 65.5% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 54.0 | 5.49e-01 | 99.0% | 81.1% |
| 3839891 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.71 | 47.0 | 4.69e-01 | 78.4% | 65.0% |
| 3596642 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 51.0 | 5.38e-01 | 91.8% | 88.2% |
| 4943168 | 1.1.7.144 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 | 0.69 | 51.0 | 5.22e-01 | 85.6% | 80.0% |
| 3397088 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 56.0 | 5.28e-01 | 87.6% | 95.7% |
| 4429352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 55.0 | 5.71e-01 | 99.0% | 92.2% |
| 3931783 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.68 | 55.0 | 5.55e-01 | 85.6% | 95.8% |
| 1714447 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.68 | 57.0 | 5.11e-01 | 88.7% | 65.9% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.67 | 54.0 | 5.53e-01 | 87.6% | 95.8% |
| 3842233 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.67 | 53.0 | 5.52e-01 | 87.6% | 92.2% |
| 4939469 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.67 | 52.0 | 5.30e-01 | 86.6% | 86.3% |
| 3575535 | 1.1.7.113 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 | 0.66 | 59.0 | 3.81e-01 | 100.0% | 76.3% |
| 3452625 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.66 | 52.0 | 5.21e-01 | 87.6% | 83.0% |
| 4939996 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.65 | 55.0 | 5.42e-01 | 92.8% | 88.6% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.64 | 58.0 | 3.75e-01 | 100.0% | 26.7% |
| 5013669 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 50.0 | 5.27e-01 | 87.6% | 95.3% |
| 3893654 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.63 | 54.0 | 5.09e-01 | 95.9% | 78.3% |
| 3415428 | 1.1.7.69 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel | 0.63 | 53.0 | 5.16e-01 | 95.9% | 83.8% |
| 4425722 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 50.0 | 5.14e-01 | 87.6% | 92.2% |
| 4016867 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 53.0 | 5.07e-01 | 92.8% | 87.8% |
| 3614391 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 53.0 | 5.24e-01 | 91.8% | 95.0% |
| 3972645 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 52.0 | 4.70e-01 | 91.8% | 69.6% |
| 3255732 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 53.0 | 5.34e-01 | 94.8% | 97.9% |
| 5013280 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 48.0 | 4.89e-01 | 87.6% | 87.4% |
| 4542543 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.61 | 51.0 | 4.93e-01 | 91.8% | 86.4% |
| 4929404 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 48.0 | 4.70e-01 | 86.6% | 94.3% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 49.0 | 5.05e-01 | 90.7% | 95.6% |
| 3974053 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 51.0 | 5.11e-01 | 95.9% | 98.0% |
| 3997045 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 51.0 | 5.17e-01 | 95.9% | 100.0% |
| 4012402 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 51.0 | 4.76e-01 | 95.9% | 95.0% |
| 1558582 | 5092.1.1.6 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Fiber_head_BAdV-4 | 0.58 | 44.0 | 4.19e-01 | 87.6% | 67.8% |
| 3988584 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.58 | 30.0 | 3.01e-01 | 86.6% | 47.0% |
| 2455725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 49.0 | 4.78e-01 | 94.8% | 93.3% |
| 1281033 | 1.1.7.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF4438 | 0.58 | 51.0 | 4.33e-01 | 99.0% | 90.6% |
| 3283603 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 4.52e-01 | 94.8% | 90.6% |
| 3707901 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 49.0 | 4.83e-01 | 95.9% | 99.0% |
| 1851176 | 5092.1.1.0 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins | 0.57 | 45.0 | 4.05e-01 | 91.8% | 61.0% |
| 3927869 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 38.0 | 3.83e-01 | 81.4% | 66.0% |
| 1385851 | 5092.1.1.3 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Reo_sigmaC | 0.56 | 45.0 | 4.04e-01 | 86.6% | 70.1% |
| 3273150 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.56 | 43.0 | 4.28e-01 | 87.6% | 81.0% |
| 3858886 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.56 | 34.0 | 4.06e-01 | 88.7% | 98.3% |
| 3893808 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.55 | 42.0 | 2.96e-01 | 80.4% | 68.1% |
| 3496352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.34e-01 | 95.9% | 94.2% |
| 3248219 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.40e-01 | 92.8% | 85.5% |
| 3576330 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.71e-01 | 87.6% | 58.5% |
| 3967128 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 29.0 | 3.33e-01 | 91.8% | 70.0% |
| 4003995 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.54 | 41.0 | 3.58e-01 | 86.6% | 52.7% |
| 3398799 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.84e-01 | 86.6% | 71.4% |
| 1519014 | 5092.1.1.2 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Reo_sigma1 | 0.54 | 42.0 | 3.63e-01 | 86.6% | 58.6% |
| 5038340 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 39.0 | 4.27e-01 | 88.7% | 100.0% |
| 3967347 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 38.0 | 4.22e-01 | 87.6% | 98.7% |
| 3250649 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.06e-01 | 93.8% | 80.0% |
| 3971760 | 1.1.7.80 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RND-MFP_C | 0.53 | 36.0 | 3.90e-01 | 83.5% | 86.3% |
| 4471013 | 11.1.1.456 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YtkA | 0.52 | 42.0 | 4.00e-01 | 87.6% | 76.5% |
| 3560911 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 3.99e-01 | 95.9% | 83.2% |
| 3551607 | 11.1.1.283 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL2RB_N1 | 0.52 | 40.0 | 3.93e-01 | 95.9% | 78.1% |
| 3648779 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.51 | 40.0 | 3.63e-01 | 86.6% | 80.0% |
| 3731651 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 4.03e-01 | 83.5% | 100.0% |
| 3588402 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 3.83e-01 | 86.6% | 79.1% |
D2
high
residues 116-227
Domain cluster:
rep: NC_022915.1__YP_008853790.1__X532_gp05__00005__D9-150
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.70 | 60.0 | 6.24e-01 | 99.1% | 100.0% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 49.0 | 4.98e-01 | 86.6% | 97.2% |
| 3p3yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 4.30e-01 | 84.8% | 87.8% |
| 1lxmA04 | 2.60.40.1380 | Mainly Beta › Sandwich › Immunoglobulin-like › E set domains; domain 4 | 0.56 | 35.0 | 4.00e-01 | 91.1% | 90.8% |
| 2b7yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 48.0 | 4.12e-01 | 100.0% | 96.7% |
| 5k6uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 4.19e-01 | 83.9% | 93.3% |
| 7tm7B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 46.0 | 3.10e-01 | 100.0% | 85.8% |
| 5vt8D02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 39.0 | 4.17e-01 | 89.3% | 92.9% |
| 2c4mA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 44.0 | 2.97e-01 | 99.1% | 81.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244855 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 4.43e-01 | 75.0% | 98.0% |
| 5028941 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.55e-01 | 87.5% | 43.4% |
| 3401051 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 39.0 | 4.39e-01 | 99.1% | 97.5% |
| 1220306 | 3597.1.1.1 ↗ | beta sandwiches › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › SusF_SusE | 0.57 | 48.0 | 4.90e-01 | 98.2% | 94.5% |
| 3920150 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.55 | 36.0 | 4.11e-01 | 88.4% | 92.5% |
| 5003346 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.55 | 38.0 | 4.22e-01 | 79.5% | 95.3% |
| 4323154 | 2.1.1.341 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30208 | 0.53 | 41.0 | 4.13e-01 | 86.6% | 80.9% |
| 3619681 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 4.13e-01 | 99.1% | 97.6% |
| 3597728 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 4.13e-01 | 91.1% | 96.7% |
| 4985588 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 42.0 | 3.95e-01 | 88.4% | 98.5% |
| 3991700 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 37.0 | 3.87e-01 | 90.2% | 87.0% |