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OQ633420.1__WEV90031.1__X__00034

Bact-Vir

OQ633420.1__WEV90031.1__X__00034

Identity

Accession:
OQ633420 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-70
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hteA01 1.20.58.1730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 59.0 4.12e-01 78.0% 27.3%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.76 68.0 4.91e-01 100.0% 83.2%
2idgA00 1.10.3480.10 Mainly Alpha › Orthogonal Bundle › TorD-like › TorD-like 0.74 52.0 3.60e-01 78.0% 23.3%
4oe8C00 1.10.8.1170 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 62.0 5.04e-01 90.0% 88.5%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.73 58.0 4.75e-01 88.0% 90.1%
2wdqC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.72 62.0 4.65e-01 100.0% 38.8%
2e1qC05 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.72 58.0 4.44e-01 90.0% 44.1%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.72 50.0 4.70e-01 92.0% 60.7%
2cwoA01 1.20.58.1200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain 0.72 57.0 4.88e-01 88.0% 56.8%
7tj9A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.71 56.0 4.29e-01 92.0% 39.6%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 55.0 5.30e-01 86.0% 73.7%
1vbgA04 1.10.189.10 Mainly Alpha › Orthogonal Bundle › Pyruvate Phosphate di-kinase; domain 2 › Pyruvate Phosphate Dikinase, domain 2 0.70 43.0 4.00e-01 78.0% 49.2%
2fnaA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 58.0 4.96e-01 90.0% 57.9%
2z4sA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.70 51.0 4.55e-01 94.0% 54.2%
5svlA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.70 59.0 5.33e-01 94.0% 72.1%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 56.0 4.73e-01 86.0% 55.1%
1jb0K00 1.20.860.20 Mainly Alpha › Up-down Bundle › Alpha-t-alpha › Photosystem I PsaK, reaction centre 0.69 55.0 5.71e-01 94.0% 100.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 40.0 4.21e-01 72.0% 63.6%
3t0yA01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.69 50.0 4.57e-01 82.0% 59.1%
3fxdC00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.69 51.0 5.16e-01 88.0% 78.0%
1osnC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 49.0 3.00e-01 78.0% 59.7%
3cqcA00 1.20.190.50 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 0.68 56.0 3.48e-01 88.0% 19.4%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.67 55.0 4.07e-01 92.0% 37.6%
4q5nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 58.0 4.36e-01 94.0% 43.8%
3qwuA03 3.30.70.2160 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 48.0 3.56e-01 80.0% 31.7%
6qu3A02 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 55.0 3.70e-01 92.0% 85.9%
1icrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.66 56.0 3.67e-01 96.0% 60.2%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.65 55.0 4.99e-01 92.0% 69.2%
2k60A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.65 45.0 4.12e-01 96.0% 54.4%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.65 52.0 4.72e-01 86.0% 65.2%
2bskB00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.65 55.0 5.14e-01 100.0% 81.5%
6f7hA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.64 55.0 3.53e-01 98.0% 72.1%
6t0bc01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 55.0 4.69e-01 94.0% 65.4%
3uk6A02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 46.0 3.92e-01 78.0% 48.2%
4ihqA02 1.10.390.40 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.63 48.0 4.53e-01 86.0% 70.3%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 51.0 3.64e-01 90.0% 44.6%
2nsfA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.63 55.0 3.90e-01 100.0% 66.7%
1irxA04 1.10.10.770 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 53.0 4.16e-01 98.0% 46.3%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 56.0 4.18e-01 96.0% 83.0%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.62 52.0 4.17e-01 94.0% 64.6%
1ng6A02 1.10.10.410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 41.0 3.98e-01 72.0% 59.6%
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.62 46.0 4.88e-01 90.0% 88.9%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.62 51.0 5.05e-01 92.0% 90.4%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.62 50.0 4.05e-01 92.0% 45.0%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.62 56.0 4.39e-01 100.0% 75.5%
4griA04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.61 44.0 4.42e-01 92.0% 77.4%
2c9oB03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 43.0 3.76e-01 78.0% 48.2%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.61 53.0 4.69e-01 100.0% 98.6%
2bg1A01 3.90.1310.40 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › 0.61 48.0 4.26e-01 92.0% 71.4%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.59 52.0 4.38e-01 100.0% 77.0%
1dp3A00 1.10.10.450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TraM protein, DNA-binding 0.59 41.0 4.05e-01 92.0% 69.1%
3r0xA01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 41.0 2.52e-01 82.0% 11.8%
7odyC01 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.58 46.0 3.73e-01 96.0% 46.7%
2wadB03 1.10.10.1230 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Penicillin-binding protein, N-terminal non-catalytic domain, head sub-domain 0.57 39.0 3.20e-01 70.0% 71.4%
1wazA00 1.10.287.910 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › bacterial mercury transporter, merf 0.57 43.0 4.50e-01 86.0% 89.1%
1j09A04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.53 37.0 3.73e-01 84.0% 79.2%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4927898 5061.1.1.1 alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY 0.84 74.0 4.35e-01 100.0% 13.6%
4527330 7010.1.1.0 alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator 0.83 68.0 6.11e-01 100.0% 65.7%
3671126 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.81 73.0 5.62e-01 100.0% 56.2%
3564198 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 54.0 3.24e-01 72.0% 28.4%
3930816 101.1.2.236 alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD 0.78 61.0 3.77e-01 84.0% 38.5%
3258025 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.78 57.0 3.55e-01 78.0% 16.0%
3599376 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.77 68.0 4.18e-01 100.0% 18.6%
3909150 5063.1.1.15 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA 0.75 66.0 5.78e-01 100.0% 69.3%
3347379 3470.1.1.26 extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › DUF543 0.74 65.0 5.95e-01 100.0% 75.4%
3214189 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.74 59.0 4.57e-01 86.0% 42.9%
5043412 1025.1.1.0 alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain 0.74 63.0 4.72e-01 92.0% 83.5%
3784181 7010.1.1.0 alpha arrays › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator › Activation-binding domain of RNA polymerase II mediator 0.73 65.0 6.13e-01 100.0% 85.0%
3196820 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.72 57.0 3.36e-01 84.0% 13.0%
3691750 376.1.1.8 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box 0.72 62.0 4.36e-01 94.0% 34.2%
2387823 7013.1.1.1 alpha bundles › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Ribosome assembly factor Efg1-like › Efg1 0.71 56.0 3.74e-01 84.0% 24.0%
3743047 604.5.1.28 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TBCC_N 0.71 56.0 4.69e-01 86.0% 50.6%
3165232 1078.1.1.0 extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit 0.71 53.0 5.55e-01 84.0% 88.9%
4056724 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.70 46.0 4.85e-01 100.0% 75.6%
3680918 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.69 54.0 4.96e-01 86.0% 70.8%
3767940 192.15.1.43 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › PH_19 0.68 60.0 5.05e-01 96.0% 100.0%
3835284 611.9.1.4 alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N 0.67 62.0 4.48e-01 100.0% 75.4%
3223457 101.1.2.661 alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD 0.67 59.0 3.64e-01 98.0% 41.8%
3952753 150.7.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › PE 0.67 56.0 4.88e-01 92.0% 62.7%
5074150 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 56.0 5.40e-01 92.0% 81.8%
4663861 5069.1.3.78 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › MIS13 0.66 59.0 5.00e-01 100.0% 68.8%
3699630 6155.1.1.1 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv 0.65 57.0 4.10e-01 94.0% 60.0%
3482354 283.1.1.1 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 0.65 51.0 3.61e-01 88.0% 28.2%
3289996 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.64 50.0 3.76e-01 100.0% 33.3%
3323862 611.9.1.4 alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N 0.64 55.0 4.65e-01 94.0% 100.0%
4053061 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.64 50.0 5.11e-01 88.0% 85.7%
3875760 11.2.1.53 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_CAPS 0.63 51.0 3.04e-01 88.0% 12.1%
4165011 192.6.1.1 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.63 50.0 5.06e-01 88.0% 85.7%
3581757 11.12.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb 0.62 58.0 3.64e-01 100.0% 22.7%
3544489 192.1.1.12 alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › PH_19 0.62 57.0 5.33e-01 100.0% 91.7%
3640760 3291.1.1.17 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF202 0.60 54.0 4.16e-01 100.0% 50.0%
3749862 605.1.1.178 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM215 0.58 49.0 4.63e-01 94.0% 86.7%
3281203 604.17.1.0 alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like 0.56 42.0 4.26e-01 86.0% 82.0%
5041642 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.56 47.0 3.09e-01 100.0% 37.9%