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OQ646789.1__WGH15463.1__X__00003
Bact-VirOQ646789.1__WGH15463.1__X__00003
Identity
- Accession:
- OQ646789 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mesyanzhinovviridae›
Pamexvirus›
Pseudomonas_phage_PA_LZ02
TaxID: 3041094
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-107
Domain cluster:
rep: MT701595.1__QPB09713.1__CPT_Shaeky_026__00026__D24-87
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.79 | 70.0 | 5.94e-01 | 98.5% | 72.6% |
| 1a73A00 | 3.90.75.10 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A | 0.72 | 64.0 | 4.78e-01 | 100.0% | 47.5% |
| 1ozjB00 | 3.90.520.10 | Alpha Beta › Alpha-Beta Complex › Smad3; Chain A › SMAD MH1 domain | 0.71 | 64.0 | 5.11e-01 | 98.5% | 55.6% |
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.62 | 34.0 | 3.15e-01 | 83.1% | 41.0% |
| 4mamB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 37.0 | 2.75e-01 | 86.2% | 25.5% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.52 | 34.0 | 3.77e-01 | 90.8% | 100.0% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.50 | 36.0 | 3.47e-01 | 98.5% | 66.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053631 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.86 | 72.0 | 5.97e-01 | 90.8% | 82.7% |
| 3266965 | 378.1.2.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › Inactive Tox-GHH domain of teneurin › HNH_3 | 0.82 | 68.0 | 6.88e-01 | 90.8% | 93.8% |
| 3539740 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.82 | 75.0 | 5.97e-01 | 100.0% | 81.6% |
| 3586841 | 378.1.1.7 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 | 0.79 | 70.0 | 5.77e-01 | 98.5% | 78.3% |
| 3965202 | 378.1.1.19 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 | 0.78 | 70.0 | 5.87e-01 | 100.0% | 81.8% |
| 89916 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.73 | 65.0 | 4.83e-01 | 100.0% | 47.5% |
| 2538864 | 378.1.1.4 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › MH1 | 0.73 | 66.0 | 5.18e-01 | 100.0% | 53.4% |
| 8233 | 378.1.1.6 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › zf-His_Me_endon | 0.72 | 64.0 | 4.78e-01 | 100.0% | 47.5% |
| 3797698 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.71 | 61.0 | 4.99e-01 | 95.4% | 54.2% |
| 3236813 | 378.1.1.4 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › MH1 | 0.71 | 60.0 | 4.62e-01 | 93.8% | 44.8% |
| 4303143 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 43.0 | 4.01e-01 | 80.0% | 52.9% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.60 | 43.0 | 4.19e-01 | 78.5% | 70.7% |
| 4968735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.36e-01 | 89.2% | 46.2% |
| 4873116 | 358.1.1.3 ↗ | a+b complex topology › SRCR-like › SRCR-like › SRCR-like › SRCR_2 | 0.56 | 39.0 | 3.37e-01 | 72.3% | 87.3% |
| 3439924 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.56 | 39.0 | 4.17e-01 | 95.4% | 98.0% |
| 2323913 | 378.1.1.24 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DNase_NucA_NucB | 0.53 | 39.0 | 3.42e-01 | 100.0% | 49.5% |
| 3659679 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.53 | 40.0 | 3.56e-01 | 83.1% | 97.9% |
| 3451965 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 40.0 | 3.84e-01 | 96.9% | 73.8% |