←Back to structures
OQ646790.1__WGH15610.1__X__00075
Bact-VirOQ646790.1__WGH15610.1__X__00075
Identity
- Accession:
- OQ646790 ↗
- Kingdom:
- phage
Quality
93.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Mesyanzhinovviridae›
Abidjanvirus›
Pseudomonas_phage_PA_LZ03
TaxID: 3041206
Cluster
View cluster (34 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-130
Domain cluster:
rep: BML_coassembly_scaffold_50_prodigal-single.1__X__X__00038__D347-509
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jh6A00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.83 | 78.0 | 6.80e-01 | 100.0% | 82.9% |
| 4h7wA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.79 | 74.0 | 6.38e-01 | 100.0% | 91.4% |
| 2d4gA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.77 | 71.0 | 6.44e-01 | 100.0% | 88.6% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 30.0 | 4.47e-01 | 93.7% | 91.1% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 31.0 | 3.63e-01 | 99.2% | 67.4% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.56 | 31.0 | 3.64e-01 | 98.4% | 77.6% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 31.0 | 3.96e-01 | 99.2% | 100.0% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 25.0 | 3.40e-01 | 93.7% | 93.1% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.51 | 41.0 | 4.19e-01 | 100.0% | 88.6% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3339513 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.80 | 74.0 | 6.61e-01 | 100.0% | 91.4% |
| 4972305 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.78 | 72.0 | 6.38e-01 | 100.0% | 86.5% |
| 5028063 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.77 | 72.0 | 6.39e-01 | 100.0% | 85.7% |
| 4149372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 34.0 | 4.64e-01 | 77.8% | 84.6% |
| 5062926 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.74 | 68.0 | 6.16e-01 | 100.0% | 84.8% |
| 3250014 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.73 | 54.0 | 5.21e-01 | 76.2% | 86.4% |
| 4343990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 35.0 | 4.22e-01 | 96.8% | 72.9% |
| 3100772 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.69 | 33.0 | 3.97e-01 | 78.6% | 67.4% |
| 4027701 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 34.0 | 3.78e-01 | 78.6% | 62.0% |
| 4446654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 31.0 | 3.98e-01 | 100.0% | 84.3% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 39.0 | 4.09e-01 | 100.0% | 68.7% |
| 3182852 | 264.1.1.10 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › tRNA_lig_CPD | 0.61 | 56.0 | 4.79e-01 | 100.0% | 97.0% |
| 5055355 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 33.0 | 3.81e-01 | 98.4% | 73.3% |
| 5012082 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 33.0 | 3.73e-01 | 96.8% | 69.5% |
| 4886159 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.60 | 26.0 | 3.32e-01 | 89.7% | 68.6% |
| 5035327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 31.0 | 3.72e-01 | 97.6% | 74.1% |
| 5055120 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.57 | 47.0 | 4.90e-01 | 100.0% | 96.5% |
| 5021953 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.57 | 47.0 | 4.89e-01 | 100.0% | 96.5% |
| 5056966 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.57 | 46.0 | 4.73e-01 | 100.0% | 90.8% |
| 4210460 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.56 | 46.0 | 4.69e-01 | 100.0% | 92.5% |
| 3509583 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.56 | 46.0 | 4.71e-01 | 100.0% | 92.5% |
| 3590914 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.56 | 44.0 | 4.70e-01 | 100.0% | 97.3% |
| 5064795 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.55 | 45.0 | 4.68e-01 | 100.0% | 92.5% |
| 3963716 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 29.0 | 3.07e-01 | 99.2% | 55.5% |
| 4955709 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.55 | 34.0 | 3.52e-01 | 100.0% | 64.2% |
| 5047563 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 29.0 | 3.56e-01 | 99.2% | 88.0% |
| 3315068 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 47.0 | 4.45e-01 | 100.0% | 94.0% |
| 4942684 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 40.0 | 3.61e-01 | 81.0% | 71.2% |
| 5046475 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.51 | 35.0 | 3.56e-01 | 100.0% | 70.8% |