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OQ672750.1__WJN63314.1__X__00061

Bact-Vir

OQ672750.1__WJN63314.1__X__00061

Identity

Accession:
OQ672750 ↗
Kingdom:
phage

Quality

87.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-57
PDB
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.73 54.0 4.38e-01 80.4% 100.0%
2dwcB02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.68 55.0 5.42e-01 100.0% 86.4%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.67 59.0 5.41e-01 98.2% 76.7%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 52.0 4.15e-01 83.9% 86.4%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 50.0 4.73e-01 83.9% 88.6%
2gc9B00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 49.0 3.61e-01 82.1% 80.1%
4fdyA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 57.0 4.34e-01 100.0% 47.0%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.65 52.0 4.71e-01 87.5% 92.1%
2m9uA00 2.30.30.850 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 4.03e-01 78.6% 87.6%
2ktyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 44.0 3.44e-01 75.0% 73.1%
2bf6A02 2.40.220.10 Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 0.62 43.0 4.17e-01 75.0% 87.9%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 53.0 4.59e-01 100.0% 73.1%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.61 44.0 3.04e-01 78.6% 69.0%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.60 52.0 4.81e-01 100.0% 98.7%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 48.0 4.34e-01 92.9% 81.7%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.60 51.0 4.46e-01 100.0% 75.6%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.60e-01 89.3% 90.0%
5zl6A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.59 51.0 3.79e-01 100.0% 66.2%
1yw4B00 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.59 46.0 2.95e-01 89.3% 23.0%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.59 33.0 3.17e-01 78.6% 46.9%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 41.0 3.59e-01 76.8% 72.5%
2bcoA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.58 44.0 2.91e-01 85.7% 28.9%
3ufiA01 2.60.40.2620 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like 0.56 44.0 3.31e-01 91.1% 57.5%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 48.0 4.50e-01 100.0% 95.7%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 47.0 4.07e-01 100.0% 73.0%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.54 37.0 3.66e-01 71.4% 89.8%
1aisA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.53 37.0 3.31e-01 76.8% 72.4%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.53 44.0 3.97e-01 94.6% 91.1%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.53 44.0 3.54e-01 100.0% 90.0%
7agvB01 3.30.70.1450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain 0.52 44.0 3.99e-01 100.0% 67.9%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.52 41.0 3.25e-01 91.1% 67.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995678 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 59.0 5.98e-01 78.6% 96.4%
3282690 219.1.1.8 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.74 61.0 4.79e-01 100.0% 43.3%
5013892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.85e-01 89.3% 100.0%
4980648 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.38e-01 91.1% 92.9%
3783617 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.70 55.0 4.90e-01 85.7% 100.0%
4120506 243.11.1.4 a+b two layers › Cystatin-like › NP_346341.1 protein › NP_346341.1 protein › PF29632 0.70 50.0 4.45e-01 76.8% 71.2%
4975150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 55.0 5.42e-01 87.5% 91.7%
5036616 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.69 57.0 5.32e-01 91.1% 87.1%
3959495 219.1.1.8 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 0.69 61.0 5.47e-01 100.0% 73.1%
4967397 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 54.0 5.21e-01 89.3% 93.8%
3862470 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 54.0 4.37e-01 100.0% 70.0%
5073223 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 57.0 4.96e-01 100.0% 85.9%
3634374 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 49.0 5.10e-01 82.1% 96.0%
4128405 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 56.0 5.19e-01 98.2% 95.7%
3708407 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.64 54.0 4.70e-01 94.6% 100.0%
3648952 1.1.7.21 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.63 55.0 4.48e-01 98.2% 80.0%
3292420 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 55.0 4.74e-01 100.0% 74.4%
5046975 1.1.7.21 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RIBIOP_C 0.63 55.0 4.93e-01 100.0% 92.5%
4526316 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 55.0 4.66e-01 100.0% 73.7%
4273414 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 55.0 5.13e-01 100.0% 98.6%
4012945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.91e-01 96.4% 98.7%
4281020 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 54.0 4.62e-01 100.0% 71.6%
3821751 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.63 52.0 4.70e-01 96.4% 81.2%
4184958 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 54.0 4.77e-01 100.0% 78.8%
3199895 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 55.0 4.62e-01 100.0% 71.6%
4854958 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 53.0 4.55e-01 100.0% 69.8%
3973553 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 53.0 4.97e-01 100.0% 97.1%
3649175 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 51.0 3.11e-01 92.9% 15.3%
4047241 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 53.0 4.49e-01 100.0% 70.5%
2814716 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 53.0 4.50e-01 100.0% 71.6%
4163711 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.61 52.0 4.57e-01 98.2% 78.8%
4512995 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 52.0 4.89e-01 100.0% 97.1%
4111597 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 50.0 4.84e-01 96.4% 100.0%
5040153 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.19e-01 85.7% 100.0%
3485387 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 46.0 4.22e-01 85.7% 97.3%
3980228 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.60 49.0 3.96e-01 100.0% 48.8%
4087314 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.59 50.0 4.54e-01 100.0% 85.0%
3396811 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.59 51.0 4.28e-01 100.0% 95.0%
4580145 1.1.8.21 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Baseplate_J 0.59 47.0 4.17e-01 91.1% 75.3%
3755862 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 45.0 3.81e-01 85.7% 77.9%
3854638 4.1.1.131 beta barrels › SH3 › SH3 › SH3 › MLVIN_C 0.57 42.0 3.63e-01 85.7% 57.0%
3524786 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 40.0 2.83e-01 76.8% 70.3%
4880562 5.1.3.26 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_2 0.55 48.0 2.82e-01 100.0% 18.2%
3290377 5.1.3.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SGL, SSL_N 0.53 41.0 2.66e-01 85.7% 81.1%
3769735 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.52 44.0 3.70e-01 100.0% 91.0%
3528458 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.51 43.0 3.69e-01 100.0% 91.0%
4180524 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.51 38.0 2.41e-01 83.9% 40.0%
D2 high residues 70-127
PDB
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.62 51.0 4.06e-01 96.6% 46.5%
4bt2A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.61 48.0 3.99e-01 100.0% 46.5%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.91e-01 98.3% 97.0%
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.60 53.0 4.92e-01 100.0% 79.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 49.0 4.46e-01 100.0% 82.1%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.59 50.0 4.17e-01 100.0% 60.6%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.59 47.0 4.16e-01 100.0% 59.1%
5wt7A00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.57 42.0 3.32e-01 82.8% 37.1%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 3.78e-01 96.6% 66.9%
2bf6A02 2.40.220.10 Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 0.57 43.0 4.19e-01 84.5% 87.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.47e-01 89.7% 100.0%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.56 42.0 3.78e-01 86.2% 98.9%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 4.05e-01 82.8% 100.0%
3x3mA01 3.30.2390.20 Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › Type VII secretion system EccB, repeat 1 domain 0.52 39.0 3.42e-01 77.6% 61.0%
3jvvA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 40.0 3.31e-01 86.2% 83.0%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3455699 4.1.1.296 beta barrels › SH3 › SH3 › SH3 › TDBD 0.73 63.0 5.60e-01 98.3% 85.5%
3662509 4.2.1.4 beta barrels › SH3 › SAND › SAND › TDBD 0.69 58.0 4.75e-01 98.3% 62.6%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 55.0 5.21e-01 100.0% 87.1%
3412691 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 49.0 4.16e-01 89.7% 91.3%
3487733 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 43.0 2.72e-01 74.1% 81.0%
4995784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 54.0 5.04e-01 100.0% 88.0%
3274454 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.59 44.0 2.51e-01 79.3% 13.3%
4001443 2.1.1.37 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind 0.59 43.0 3.71e-01 77.6% 72.2%
3412424 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.57 42.0 4.29e-01 100.0% 81.8%
3272021 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.57 45.0 3.46e-01 100.0% 74.3%
3591613 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.56 44.0 3.09e-01 86.2% 67.0%
3402932 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 43.0 4.39e-01 100.0% 85.5%
3391229 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.56 40.0 4.26e-01 100.0% 88.0%
135919 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.56 42.0 3.78e-01 86.2% 98.9%
4937158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 4.55e-01 100.0% 91.7%
3405830 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.55 42.0 4.30e-01 100.0% 83.6%
4120366 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.55 41.0 4.24e-01 86.2% 94.5%
4016180 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.54 44.0 3.36e-01 100.0% 96.5%
4120414 101.1.2.194 alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH 0.54 45.0 3.33e-01 100.0% 65.7%
3778012 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.54 38.0 3.48e-01 79.3% 95.3%
3402494 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 39.0 4.08e-01 100.0% 84.9%
3618015 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.54 35.0 3.91e-01 89.7% 86.7%
3626593 633.23.1.5 alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.53 40.0 2.82e-01 86.2% 67.7%
3405868 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.53 38.0 4.10e-01 100.0% 90.0%
3412450 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.53 40.0 4.13e-01 100.0% 87.3%
3617423 1.1.2.19 beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.52 46.0 3.91e-01 100.0% 70.5%
3700027 633.23.1.23 alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.52 39.0 2.89e-01 84.5% 92.3%
3735392 2007.1.1.32 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HET 0.52 35.0 2.46e-01 87.9% 19.7%
3491870 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.52 26.0 3.14e-01 100.0% 65.7%
3790774 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 37.0 3.06e-01 81.0% 45.8%
3405816 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.51 39.0 4.02e-01 100.0% 87.3%
4168173 281.1.1.1 a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II 0.50 39.0 2.84e-01 94.8% 48.8%
3440053 603.1.1.146 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TMEM62_C 0.50 38.0 2.83e-01 87.9% 60.5%
5076554 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.50 43.0 3.93e-01 100.0% 81.2%