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OQ674106.1__WFS70221.1__PVA65_000074__00074
Bact-VirOQ674106.1__WFS70221.1__PVA65_000074__00074
Identity
- Accession:
- OQ674106 ↗
- Kingdom:
- phage
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-50
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5a35A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.69 | 60.0 | 4.65e-01 | 100.0% | 98.2% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 55.0 | 3.34e-01 | 89.8% | 29.4% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 56.0 | 4.18e-01 | 93.9% | 37.2% |
| 2ghsA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.68 | 57.0 | 3.52e-01 | 93.9% | 78.3% |
| 1qhuA01 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.67 | 55.0 | 3.78e-01 | 93.9% | 36.6% |
| 3da7E00 | 3.40.20.20 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › | 0.67 | 58.0 | 4.62e-01 | 100.0% | 84.5% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.67 | 52.0 | 3.26e-01 | 89.8% | 30.8% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 55.0 | 3.38e-01 | 93.9% | 19.3% |
| 1e2tA02 | 3.30.1120.150 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 51.0 | 4.30e-01 | 87.8% | 57.0% |
| 1k32A01 | 2.120.10.60 | Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain | 0.66 | 56.0 | 3.54e-01 | 100.0% | 75.0% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.66 | 52.0 | 3.06e-01 | 89.8% | 22.0% |
| 4u7aA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 56.0 | 3.36e-01 | 100.0% | 86.5% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 53.0 | 3.25e-01 | 93.9% | 19.1% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 48.0 | 4.32e-01 | 85.7% | 71.2% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 49.0 | 4.42e-01 | 91.8% | 60.9% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.64 | 53.0 | 4.09e-01 | 98.0% | 67.2% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.63 | 52.0 | 3.18e-01 | 93.9% | 15.5% |
| 3cwxA00 | 3.40.1420.20 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD | 0.63 | 50.0 | 3.89e-01 | 95.9% | 41.6% |
| 1xipA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 54.0 | 3.26e-01 | 100.0% | 68.1% |
| 3mtvA01 | 2.30.31.30 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Arterivirus nps1beta, nuclease domain | 0.62 | 43.0 | 3.68e-01 | 73.5% | 75.0% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.62 | 53.0 | 3.10e-01 | 100.0% | 87.4% |
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.62 | 52.0 | 3.61e-01 | 100.0% | 75.9% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 50.0 | 3.79e-01 | 95.9% | 36.1% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.62 | 47.0 | 3.31e-01 | 87.8% | 26.6% |
| 1k32A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 52.0 | 3.19e-01 | 100.0% | 92.0% |
| 1yzbA01 | 3.90.70.40 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 52.0 | 3.95e-01 | 98.0% | 45.2% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 45.0 | 4.22e-01 | 83.7% | 92.1% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 2.94e-01 | 100.0% | 88.7% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.59 | 50.0 | 3.96e-01 | 100.0% | 96.4% |
| 1b9mB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 45.0 | 4.10e-01 | 89.8% | 68.1% |
| 1bpeA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.58 | 43.0 | 4.20e-01 | 87.8% | 76.3% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 38.0 | 2.60e-01 | 71.4% | 16.7% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.57 | 48.0 | 3.93e-01 | 100.0% | 76.2% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 44.0 | 3.28e-01 | 91.8% | 60.0% |
| 4cckA03 | 3.90.930.40 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.56 | 44.0 | 3.33e-01 | 95.9% | 71.2% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 44.0 | 3.93e-01 | 100.0% | 87.8% |
| 2a6aB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 40.0 | 3.25e-01 | 87.8% | 84.9% |
| 7cr6D01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.54 | 41.0 | 3.64e-01 | 89.8% | 87.8% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 40.0 | 3.50e-01 | 89.8% | 48.9% |
| 5gaeG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.53 | 38.0 | 3.37e-01 | 85.7% | 48.1% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.64e-01 | 89.8% | 77.6% |
| 1vq8E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 39.0 | 3.44e-01 | 89.8% | 53.2% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.51 | 37.0 | 3.32e-01 | 87.8% | 50.0% |
| 3tu3B01 | 3.30.720.80 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 39.0 | 3.54e-01 | 93.9% | 75.0% |
| 1h8uB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.50 | 42.0 | 3.30e-01 | 100.0% | 75.9% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3623430 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.75 | 58.0 | 4.01e-01 | 100.0% | 25.6% |
| 3407060 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.72 | 58.0 | 4.04e-01 | 100.0% | 26.7% |
| 3217981 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.72 | 58.0 | 4.01e-01 | 91.8% | 50.0% |
| 4081039 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.71 | 50.0 | 4.48e-01 | 75.5% | 58.6% |
| 5059043 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 56.0 | 3.38e-01 | 89.8% | 26.4% |
| 5009392 | 5.1.3.127 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Tricorn_N | 0.69 | 61.0 | 3.80e-01 | 100.0% | 87.4% |
| 4348606 | 4.1.1.440 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27165 | 0.69 | 59.0 | 5.45e-01 | 100.0% | 80.0% |
| 3999896 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.69 | 53.0 | 5.15e-01 | 85.7% | 85.5% |
| 3815146 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.68 | 57.0 | 3.47e-01 | 95.9% | 29.9% |
| 3822726 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.67 | 55.0 | 3.43e-01 | 95.9% | 32.0% |
| 4939670 | 5.1.3.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PD40 | 0.67 | 57.0 | 3.56e-01 | 100.0% | 78.7% |
| None | — | 0.67 | 52.0 | 3.37e-01 | 85.7% | 20.9% | |
| 3805299 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.67 | 54.0 | 3.33e-01 | 91.8% | 18.5% |
| 3679683 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 52.0 | 2.90e-01 | 89.8% | 10.9% |
| 3938259 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.66 | 52.0 | 3.67e-01 | 100.0% | 26.7% |
| 3823899 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.66 | 53.0 | 3.40e-01 | 91.8% | 43.5% |
| 3273166 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 51.0 | 3.16e-01 | 89.8% | 29.1% |
| 3882452 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.65 | 55.0 | 3.79e-01 | 100.0% | 64.9% |
| 3630390 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.64 | 56.0 | 3.35e-01 | 100.0% | 84.7% |
| 3682683 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.64 | 55.0 | 3.53e-01 | 100.0% | 33.2% |
| 3583675 | 5.1.4.321 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 | 0.64 | 56.0 | 3.37e-01 | 100.0% | 84.7% |
| 3831275 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.64 | 54.0 | 3.33e-01 | 100.0% | 83.6% |
| 3739320 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.64 | 53.0 | 3.56e-01 | 100.0% | 61.0% |
| 2841490 | 5.1.5.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_WDR75_1st | 0.63 | 50.0 | 3.75e-01 | 89.8% | 68.2% |
| 3245157 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.63 | 51.0 | 3.49e-01 | 100.0% | 23.7% |
| 3587925 | 220.1.1.242 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EbsA | 0.63 | 49.0 | 4.40e-01 | 91.8% | 66.7% |
| 3824049 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.62 | 52.0 | 3.33e-01 | 100.0% | 92.5% |
| 3497811 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.61 | 51.0 | 3.57e-01 | 93.9% | 66.1% |
| 3834402 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.61 | 52.0 | 3.21e-01 | 100.0% | 78.3% |
| 3833269 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.61 | 52.0 | 3.24e-01 | 100.0% | 84.0% |
| 3225057 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.61 | 48.0 | 3.34e-01 | 91.8% | 43.2% |
| 4302938 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.61 | 48.0 | 4.08e-01 | 89.8% | 54.1% |
| 3364812 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 49.0 | 3.26e-01 | 95.9% | 64.3% |
| 3568386 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.59 | 44.0 | 2.76e-01 | 79.6% | 32.1% |
| None | — | 0.59 | 44.0 | 2.60e-01 | 79.6% | 22.1% | |
| 3400954 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.58 | 51.0 | 3.14e-01 | 100.0% | 89.4% |
| 3264116 | 5.1.5.76 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N | 0.58 | 45.0 | 2.80e-01 | 91.8% | 24.9% |
| 1921564 | 101.1.2.237 ↗ | alpha arrays › HTH › HTH › winged helix domain › ThcOx | 0.57 | 50.0 | 3.83e-01 | 100.0% | 75.7% |
| 3227356 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.57 | 48.0 | 3.21e-01 | 100.0% | 68.8% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 49.0 | 3.62e-01 | 100.0% | 41.5% |
| 5014250 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 50.0 | 4.27e-01 | 100.0% | 90.0% |
| 5083781 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 46.0 | 3.30e-01 | 100.0% | 63.5% |
| 5026901 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 40.0 | 3.81e-01 | 77.6% | 70.0% |
| 3453949 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 47.0 | 2.95e-01 | 100.0% | 15.6% |
| 5079258 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.56 | 36.0 | 3.78e-01 | 71.4% | 71.1% |
| 3839750 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.55 | 40.0 | 2.72e-01 | 81.6% | 52.4% |
| 4454944 | 101.1.2.468 ↗ | alpha arrays › HTH › HTH › winged helix domain › McbB | 0.54 | 46.0 | 3.97e-01 | 100.0% | 98.8% |
| 5016434 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 43.0 | 3.82e-01 | 95.9% | 92.0% |
| 1866795 | 2484.1.1.91 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like | 0.52 | 43.0 | 2.87e-01 | 95.9% | 92.6% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.52 | 39.0 | 3.79e-01 | 93.9% | 78.3% |
| 4290521 | 2484.1.1.91 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like | 0.52 | 43.0 | 2.77e-01 | 100.0% | 76.6% |
| 3212404 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 45.0 | 2.82e-01 | 100.0% | 31.0% |